RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 MYLPFQ96A32 169 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 ACCSQ96QU6 501 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 CBWD1Q9BRT8 395 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 PDE11AQ9HCR9 933 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 TMEM9BQ9NQ34 198 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 CRTAC1Q9NQ79 661 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 OLFML3Q9NRN5 406 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 FRMD3A2A2Y4 597 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 GOLGA8IPA6NC78 632 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 GOLGA8JA6NMD2 632 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 LEFTY2O00292 366 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 ATP2C2O75185 946 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 GCNT3O95395 438 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 OLFM2O95897 454 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 GAP43P17677 238 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 CSRP1P21291 193 aaKnown RBP16.45■□□□□ 0.22
CHMP3-202ENST00000393773 MESP2Q0VG99 397 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 NR1H3Q13133 447 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 CRY1Q16526 586 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 C4orf50Q6ZRC1 276 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 SFTPA1Q8IWL2 248 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 CACTINQ8WUQ7 758 aaKnown RBP16.45■□□□□ 0.22
CHMP3-202ENST00000393773 SPATA17Q96L03 361 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 TTLL2Q9BWV7 592 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 ZMIZ1Q9ULJ6 1067 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 PCNX2A6NKB5 2137 aa16.45■□□□□ 0.22
CHMP3-202ENST00000393773 GON4LQ3T8J9 2241 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 KHNYNO15037 678 aaKnown RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 TOP3BO95985 862 aaKnown RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 LDHAP00338 332 aaKnown RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 KRT19P08727 400 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 TMEM191BP0C7N4 346 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 PFKLP17858 780 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 HDCP19113 662 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 SPINK2P20155 84 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 PDE6CP51160 858 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 RBP5P82980 135 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 LMBRD2Q68DH5 695 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 VSTM1Q6UX27 236 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 TMEM92Q6UXU6 159 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 KDF1Q8NAX2 398 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 CEP295NLQ96MC4 621 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 FBXO2Q9UK22 296 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 CDH9Q9ULB4 789 aa16.44■□□□□ 0.22
CHMP3-202ENST00000393773 ANKRD11Q6UB99 2663 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-202ENST00000393773 CEACAM1P13688 526 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 BDNFP23560 247 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 LMO2P25791 158 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 P2RY2P41231 377 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 SLC7A9P82251 487 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 C12orf40Q86WS4 652 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 CCDC33Q8N5R6 958 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 KIAA1958Q8N8K9 716 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 GATA6Q92908 595 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 EVLQ9UI08 416 aaPredicted RBP16.43■□□□□ 0.22
CHMP3-202ENST00000393773 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 NME7Q9Y5B8 376 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 CLIC4Q9Y696 253 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 MYH10P35580 1976 aa16.43■□□□□ 0.22
CHMP3-202ENST00000393773 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 DHPSP49366 369 aaPredicted RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 NOP14P78316 857 aaKnown RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 IRX4P78413 519 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 MRPS21P82921 87 aaKnown RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 ALCAMQ13740 583 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 LARP1BQ659C4 914 aaKnown RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 DPH6Q7L8W6 267 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 ALLCQ8N6M5 410 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 IL17RCQ8NAC3 791 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 HPDLQ96IR7 371 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 ANKRD36BP1Q96IX9 119 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 RNF38Q9H0F5 515 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 PCIF1Q9H4Z3 704 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 TMEM30AQ9NV96 361 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 INTS13Q9NVM9 706 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 MAGEC2Q9UBF1 373 aaPredicted RBP16.42■□□□□ 0.22
CHMP3-202ENST00000393773 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 CPQQ9Y646 472 aa16.42■□□□□ 0.22
CHMP3-202ENST00000393773 A0A087X0B3 334 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 ZNF840PA6NDX5 716 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 SGK1O00141 431 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 TULP1O00294 542 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 SCAMP3O14828 347 aaKnown RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms