RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 ATP5F1P24539 256 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 RRM2P31350 389 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CCT8P50990 548 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 AFF1P51825 1210 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 DLG1Q12959 904 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PTK7Q13308 1070 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ACCSLQ4AC99 568 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PDCD4Q53EL6 469 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 TMEM26Q6ZUK4 368 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ARHGEF25Q86VW2 580 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 TBC1D21Q8IYX1 336 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 KRT35Q92764 455 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 TP53INP1Q96A56 240 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 GRAMD1AQ96CP6 724 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CMTM5Q96DZ9 223 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 RNF31Q96EP0 1072 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 SERAC1Q96JX3 654 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 C8orf37Q96NL8 207 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 FICDQ9BVA6 458 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 FAM49AQ9H0Q0 323 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 FBXO28Q9NVF7 368 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 POLR3BQ9NW08 1133 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 CD274Q9NZQ7 290 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MYO3BQ8WXR4 1341 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 SYNGAP1Q96PV0 1343 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ERBINQ96RT1 1412 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 A0A087X0T9 212 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PSMD14O00487 310 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MYL12BO14950 172 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MAST3O60307 1309 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PGK1P00558 417 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PRH1P02810 166 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ABCB1P08183 1280 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 PTPRCP08575 1304 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PRG2P13727 222 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ZNF14P17017 642 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 ATP6V1C1P21283 382 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 AZGP1P25311 298 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 GEMIN4P57678 1058 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 RAB25P57735 213 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CACNB2Q08289 660 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 SLC20A2Q08357 652 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MKRN3Q13064 507 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 DNASE1L3Q13609 305 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ADRM1Q16186 407 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 BRMS1LQ5PSV4 323 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 SLFN12LQ6IEE8 588 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PMF1Q6P1K2 205 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 GALNT18Q6P9A2 607 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 LMBR1LQ6UX01 489 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 RIPOR1Q6ZS17 1223 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ANKS3Q6ZW76 656 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CCDC33Q8N5R6 958 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CD300LFQ8TDQ1 290 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 RORBQ92753 470 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 GTPBP3Q969Y2 492 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 MARK4Q96L34 752 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MAGEB10Q96LZ2 347 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 ZNF649Q9BS31 505 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ABCG4Q9H172 646 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ZNF644Q9H582 1327 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 EPS8L2Q9H6S3 715 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PRDM16Q9HAZ2 1276 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 COPG2Q9UBF2 871 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CPSF3Q9UKF6 684 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 PCDHA12Q9UN75 941 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CLEC11AQ9Y240 323 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PRAMEF33A0A0G2JMD5 474 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 FAM196BA6NMK8 535 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 C12orf71A8MTZ7 269 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PRAMEF10O60809 474 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 APOC1P02654 83 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 NTRK1P04629 796 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CYP11B2P19099 503 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 GADD45AP24522 165 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MAGEA11P43364 429 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 RGS19P49795 217 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 STXBP1P61764 594 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 ROR1Q01973 937 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 CENPCQ03188 943 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PTSQ03393 145 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 KCNMA1Q12791 1236 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MAPK7Q13164 816 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 PABPC4Q13310 644 aaKnown RBP eCLIP3.38□□□□□ -1.87
PHF3-202ENST00000393387 SNX17Q15036 470 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 NKX1-1Q15270 411 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 KRT24Q2M2I5 525 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 FAM47CQ5HY64 1035 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 EFHC1Q5JVL4 640 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 MTFR2Q6P444 385 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 HAGHLQ6PII5 290 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 BNC2Q6ZN30 1099 aaPredicted RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 PAGE2Q7Z2X7 111 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 ERICH1Q86X53 443 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 OR52K2Q8NGK3 314 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 OR8K3Q8NH51 312 aa3.38□□□□□ -1.87
PHF3-202ENST00000393387 NSUN6Q8TEA1 469 aaKnown RBP3.38□□□□□ -1.87
PHF3-202ENST00000393387 MAFIPQ8WZ33 124 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms