RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 KCNH2Q12809 1159 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CUL2Q13617 745 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGAP15Q53QZ3 475 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 RRAGAQ7L523 313 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 GPRIN1Q7Z2K8 1008 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 UNC93AQ86WB7 457 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 IRF2BP1Q8IU81 584 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGEF19Q8IW93 802 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SUGP1Q8IWZ8 645 aaKnown RBP8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CRYBG2Q8N1P7 616 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 TMEM105Q8N8V8 129 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 MLKLQ8NB16 471 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLC4A11Q8NBS3 891 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SCAMP5Q8TAC9 235 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRMT2BQ96GJ1 504 aaKnown RBP8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SMARCD1Q96GM5 515 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SPATA17Q96L03 361 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 C8orf48Q96LL4 319 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CYP2S1Q96SQ9 504 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SMOQ99835 787 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 NT5C1AQ9BXI3 368 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 FOXQ1Q9C009 403 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 TASP1Q9H6P5 420 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 BRD9Q9H8M2 597 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CYP3A43Q9HB55 503 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLC2A4RGQ9NR83 387 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 HEBP1Q9NRV9 189 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 COQ4Q9Y3A0 265 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 DMDP11532 3685 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 TECTAO75443 2155 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 ATP8B3O60423 1300 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 STK25O00506 426 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 SCAMP3O14828 347 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 GNA14O95837 355 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 CCDC192P0DO97 292 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 PSMC3P17980 439 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 RFX1P22670 979 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 AVPR1AP37288 418 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 SOX9P48436 509 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 PGFP49763 221 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLC5A3P53794 718 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TNK2Q07912 1038 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TAF10Q12962 218 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TPD52L1Q16890 204 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLC44A4Q53GD3 710 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRIM68Q6AZZ1 485 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 GJB7Q6PEY0 223 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 FOXR2Q6PJQ5 311 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 CLEC20AQ6ZU45 233 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 C11orf57Q6ZUT1 292 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 BMP8AQ7Z5Y6 402 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 YAF2Q8IY57 180 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 CMTM8Q8IZV2 173 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 PPM1KQ8N3J5 372 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 UBR7Q8N806 425 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARL14EPQ8N8R7 260 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 LMO3Q8TAP4 145 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 MRPS31Q92665 395 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 USP13Q92995 863 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 CYFIP2Q96F07 1278 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TMEM176AQ96HP8 235 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 HEXIM2Q96MH2 286 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 CRACR2AQ9BSW2 395 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRMT61BQ9BVS5 477 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TTLL2Q9BWV7 592 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 GPR88Q9GZN0 384 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 INTS2Q9H0H0 1204 aaKnown RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TBC1D17Q9HA65 648 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRPV4Q9HBA0 871 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 DMAP1Q9NPF5 467 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 GMIPQ9P107 970 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 UXTQ9UBK9 157 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 WNT16Q9UBV4 365 aa8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 MTF2Q9Y483 593 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRAV19A0A0A6YYK7 116 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZNF840PA6NDX5 716 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TULP2O00295 520 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARNTLO00327 626 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 DPYSL4O14531 572 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TNFRSF10BO14763 440 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZNF263O14978 683 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 CYP26A1O43174 497 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 FGFR1OPO95684 399 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 CKMP06732 381 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 DCNP07585 359 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 CD19P15391 556 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 ACO1P21399 889 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 AVPR2P30518 371 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 MTIF2P46199 727 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZXDBP98169 803 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 MLF2Q15773 248 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms