RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 H3BNX3 289 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 HNRNPCL1O60812 293 aaKnown RBP11.96□□□□□ -0.5
PDCD4-202ENST00000393104 SNNO75324 88 aaPredicted RBP11.96□□□□□ -0.5
PDCD4-202ENST00000393104 CD48P09326 243 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 MMP8P22894 467 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 GHRHRQ02643 423 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 SLC25A11Q02978 314 aaKnown RBP11.96□□□□□ -0.5
PDCD4-202ENST00000393104 GSTA3Q16772 222 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 ZNF365Q70YC5 407 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 PDSS2Q86YH6 399 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 HAUS1Q96CS2 278 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 FGD4Q96M96 766 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 AGO4Q9HCK5 861 aaKnown RBP11.96□□□□□ -0.5
PDCD4-202ENST00000393104 TJP2Q9UDY2 1190 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.5
PDCD4-202ENST00000393104 CENPFP49454 3210 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 CYB561D2O14569 222 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 VILLO15195 856 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 GYG2O15488 501 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TM7SF2O76062 418 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 ATG7O95352 703 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 PYGBP11216 843 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 SERPINB4P48594 390 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 RASSF2P50749 326 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 POLE2P56282 527 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 MTMR2Q13614 643 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 CCNIQ14094 377 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 ZACNQ401N2 412 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 BBOF1Q8ND07 529 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TSSK1BQ9BXA7 367 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TEX264Q9Y6I9 313 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 RFPL1O75677 317 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 STIP1P31948 543 aaKnown RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 CDK7P50613 346 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TSNAXIP1Q2TAA8 658 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 KAZNQ674X7 775 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 IZUMO2Q6UXV1 221 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 FBXO36Q8NEA4 188 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 MAIP1Q8WWC4 291 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 GLIS2Q9BZE0 524 aaPredicted RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 CYTH4Q9UIA0 394 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UGT1A9O60656 530 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
PDCD4-202ENST00000393104 L1CAMP32004 1257 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 GTF2H1P32780 548 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 ZNF76P36508 570 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 PGM2L1Q6PCE3 622 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 C3orf62Q6ZUJ4 267 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 SAMD3Q8N6K7 520 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 B4GALNT2Q8NHY0 566 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 NT5C1BQ96P26 610 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 NDNQ99608 321 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UGT1A7Q9HAW7 530 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UGT1A10Q9HAW8 530 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UGT1A8Q9HAW9 530 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 PCDH9Q9HC56 1237 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 SIRPGQ9P1W8 387 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
PDCD4-202ENST00000393104 TCRBV9S1A1TA0A576 114 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 A8MXQ7 604 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 AVILO75366 819 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 CCNFP41002 786 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 SNRPFP62306 86 aaKnown RBP11.94□□□□□ -0.5
PDCD4-202ENST00000393104 SLC25A41Q8N5S1 370 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 TRIM56Q9BRZ2 755 aaKnown RBP11.94□□□□□ -0.5
PDCD4-202ENST00000393104 VPS37BQ9H9H4 285 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 ZNF195O14628 629 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
PDCD4-202ENST00000393104 ASNSP08243 561 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 HARSP12081 509 aaKnown RBP11.94□□□□□ -0.5
PDCD4-202ENST00000393104 USP4Q13107 963 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 DCAF15Q66K64 600 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 NET1Q7Z628 596 aaPredicted RBP11.94□□□□□ -0.5
PDCD4-202ENST00000393104 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 SESTD1Q86VW0 696 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 ITFG2Q969R8 447 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 SYT17Q9BSW7 474 aa11.94□□□□□ -0.5
PDCD4-202ENST00000393104 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms