RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 NEO1Q92859 1461 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 EFCAB10A6NFE3 127 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 APOC1P02654 83 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 THRAP10827 490 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 KCTD17Q8N5Z5 321 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 TRPV3Q8NET8 790 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 CHCHD6Q9BRQ6 235 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 SPON2Q9BUD6 331 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 DSN1Q9H410 356 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 MOCS2O96007 188 aaPredicted RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 CBX5P45973 191 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 SARSP49591 514 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 KIZQ2M2Z5 673 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 EID3Q8N140 333 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 KPNA1P52294 538 aaPredicted RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 AMPD2Q01433 879 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 CAMK2GQ13555 558 aaPredicted RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 FRMD5Q7Z6J6 570 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 RIN2Q8WYP3 895 aaPredicted RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 ANXA9O76027 345 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 KNOP1Q1ED39 458 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 ADGRF4Q8IZF3 695 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF786Q8N393 782 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 UCMAQ8WVF2 138 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 TMEM47Q9BQJ4 181 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 ING4Q9UNL4 249 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 RPS6KA5O75582 802 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 EXOC3L1Q86VI1 746 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 UBP1Q9NZI7 540 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 RABGEF1Q9UJ41 708 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 CLPTM1O96005 669 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 ERVK-10P10266 1014 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 MDH1P40925 334 aaKnown RBP15.24■□□□□ 0.03
CCDC50-201ENST00000392455 ALFQ53S48 1182 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 NAPEPLDQ6IQ20 393 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 SENP7Q9BQF6 1050 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 GJB4Q9NTQ9 266 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 GTF2A1LQ9UNN4 478 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 FKBP6O75344 327 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 LYNP07948 512 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 GSTM1P09488 218 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 TRIT1Q9H3H1 467 aaKnown RBP15.24■□□□□ 0.03
CCDC50-201ENST00000392455 NDUFB5O43674 189 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 FCER1AP12319 257 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 ACLYP53396 1101 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 PCNX4Q63HM2 1172 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 RNPEPQ9H4A4 650 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 TRIM39Q9HCM9 518 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 KCND2Q9NZV8 630 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 UTYO14607 1347 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 AREL1O15033 823 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 RPLP2P05387 115 aaKnown RBP15.24■□□□□ 0.03
CCDC50-201ENST00000392455 TCF4P15884 667 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 NCAPD2Q15021 1401 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 RNASEH1O60930 286 aaKnown RBP15.24■□□□□ 0.03
CCDC50-201ENST00000392455 CACNB2Q08289 660 aaPredicted RBP15.24■□□□□ 0.03
CCDC50-201ENST00000392455 KCNT1Q5JUK3 1230 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 PID1Q7Z2X4 250 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 AADATQ8N5Z0 425 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 DCLRE1BQ9H816 532 aa15.24■□□□□ 0.03
CCDC50-201ENST00000392455 A0A088AWK7 358 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 PPP1R37O75864 691 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 CPB1P15086 417 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF10P21506 573 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF211Q13398 564 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF746Q6NUN9 644 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SPATA2LQ8IUW3 424 aaPredicted RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ATXN7L3BQ96GX2 97 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SLC9A7Q96T83 725 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 THUMPD3Q9BV44 507 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■■■■ 42.9
CCDC50-201ENST00000392455 CD4P01730 458 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 FDFT1P37268 417 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 PRKAA2P54646 552 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 ARHGAP15Q53QZ3 475 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SLC22A9Q8IVM8 553 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 GSPT2Q8IYD1 628 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 KIF12Q96FN5 646 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 KATNAL1Q9BW62 490 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 SYNDIG1Q9H7V2 258 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 DKK3Q9UBP4 350 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
CCDC50-201ENST00000392455 NR3C2P08235 984 aa15.23■□□□□ 0.03
CCDC50-201ENST00000392455 GRIK1P39086 918 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms