RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 ARHGAP22Q7Z5H3 698 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 PRUNE1Q86TP1 453 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 RELL1Q8IUW5 271 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 PARK7Q99497 189 aaKnown RBP10.11□□□□□ -0.79
COL6A3-204ENST00000392003 FRMD8P1Q9BZ68 369 aaPredicted RBP10.11□□□□□ -0.79
COL6A3-204ENST00000392003 MIS12Q9H081 205 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 CTNNAL1Q9UBT7 734 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 TMEM98Q9Y2Y6 226 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.11□□□□□ -0.79
COL6A3-204ENST00000392003 SIP14410 1827 aa10.11□□□□□ -0.79
COL6A3-204ENST00000392003 RASA4BC9J798 803 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 POC1B-GALNT4F8VUJ3 575 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 RASA4O43374 803 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 SUN1O94901 812 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ITGB3P05106 788 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 STAG3L1P0CL83 205 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 MCF2P10911 925 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 GHRP10912 638 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PROZP22891 400 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 RFC1P35251 1148 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CDH8P55286 799 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 OGDHQ02218 1023 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 KYAT1Q16773 422 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PTPN20Q4JDL3 420 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ANKRD20A8PQ5CZ79 823 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 NUGGCQ68CJ6 796 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 RFX6Q8HWS3 928 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 KCTD6Q8NC69 237 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 XYLT2Q9H1B5 865 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CYP3A43Q9HB55 503 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PCDH9Q9HC56 1237 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 RABL2AQ9UBK7 228 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 LGALS13Q9UHV8 139 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 EFR3BQ9Y2G0 817 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 TCP11X1B4DZS4 312 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ABLIM1O14639 778 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 STRNO43815 780 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ITGAVP06756 1048 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ZSCAN5DPP0CG00 497 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 INSRRP14616 1297 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 DESP17661 470 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 KRT15P19012 456 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ATICP31939 592 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CDKN2BP42772 138 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 HUNKP57058 714 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 MBTD1Q05BQ5 628 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ZNF252P-AS1Q0IIN9 211 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ZNF268Q14587 947 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 GDAP1Q8TB36 358 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 NKD2Q969F2 451 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 HEXIM2Q96MH2 286 aaKnown RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ADPGKQ9BRR6 497 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 MAK16Q9BXY0 300 aaKnown RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PTPRHQ9HD43 1115 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 METTL5Q9NRN9 209 aaKnown RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ZBTB42B2RXF5 422 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 M0QYV0 167 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 SOCS7O14512 581 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CST8O60676 142 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 CSDE1O75534 798 aaKnown RBP10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ADCYAP1R1P41586 468 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 IL9RQ01113 521 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ANKS1BQ7Z6G8 1248 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 FAM228AQ86W67 206 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 FNIP1Q8TF40 1166 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 TMEM121Q9BTD3 319 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 OSBPL7Q9BZF2 842 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ASNSD1Q9NWL6 643 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 PCSK1NQ9UHG2 260 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 SHOC2Q9UQ13 582 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 N6AMT1Q9Y5N5 214 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 ACTL7BQ9Y614 415 aa10.1□□□□□ -0.79
COL6A3-204ENST00000392003 WDR90Q96KV7 1748 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TCRBV5S1A1TA0A578 114 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 NFICP08651 508 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PHBP35232 272 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 MYO1EQ12965 1108 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 SMTNL2Q2TAL5 461 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 LACTB2Q53H82 288 aaPredicted RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CCDC62Q6P9F0 684 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PIGWQ7Z7B1 504 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ZBED8Q8IZ13 594 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TTC39CQ8N584 583 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TMEM176AQ96HP8 235 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 BRD8Q9H0E9 1235 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ASB7Q9H672 318 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PPCSQ9HAB8 311 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 MLXIPLQ9NP71 852 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 LNPEPQ9UIQ6 1025 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 AGAP1Q9UPQ3 857 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 USP15Q9Y4E8 981 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms