RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZFP36L2P47974 494 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ALDH9A1P49189 494 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ANXA11P50995 505 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ANTXR2P58335 489 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CLRN1P58418 232 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 LINC00315P59091 139 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KRTAP12-1P59990 96 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 RPS7P62081 194 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TUBB4BP68371 445 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 NDPQ00604 133 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 APBA1Q02410 837 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TNFAIP2Q03169 654 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ROM1Q03395 351 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 Q0VFX4 171 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SNTA1Q13424 505 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 HDAC1Q13547 482 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 RAPSNQ13702 412 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ENPP2Q13822 863 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ELOAQ14241 798 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 RASA3Q14644 834 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PDCD1Q15116 288 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SF3A2Q15428 464 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TBCCQ15814 346 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM187BQ17R55 369 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KRTAP6-3Q3LI67 103 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ODF3L2Q3SX64 289 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PREPLQ4J6C6 727 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 IQCCQ4KMZ1 466 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 RRP12Q5JTH9 1297 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SNAP47Q5SQN1 464 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TMTC4Q5T4D3 741 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SEL1L3Q68CR1 1132 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ANKS6Q68DC2 871 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 INTS3Q68E01 1043 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ARHGAP17Q68EM7 881 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TTC19Q6DKK2 380 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SWSAP1Q6NVH7 229 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZCCHC8Q6NZY4 707 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF613Q6PF04 617 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TRIM65Q6PJ69 517 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 C19orf48Q6RUI8 117 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TSHZ1Q6ZSZ6 1077 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 EP400NLQ6ZTU2 488 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FOXL2NBQ6ZUU3 175 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PDZD4Q76G19 769 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF534Q76KX8 674 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC26A9Q7LBE3 791 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ADAT2Q7Z6V5 191 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TBC1D1Q86TI0 1168 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 IQCHQ86VS3 1027 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 LIX1LQ8IVB5 337 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CCDC103Q8IW40 242 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM178BQ8IXR5 827 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PPIL6Q8IXY8 311 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MB21D2Q8IYB1 491 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ENTHD1Q8IYW4 607 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GPD1LQ8N335 351 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FSTL5Q8N475 847 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MAB21L3Q8N8X9 362 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TERB1Q8NA31 727 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TEX45Q8NA69 505 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PCSK9Q8NBP7 692 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC44A5Q8NCS7 719 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PHC3Q8NDX5 983 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 HIPK4Q8NE63 616 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TMIEQ8NEW7 156 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CMASQ8NFW8 434 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 OR1N1Q8NGS0 311 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SPATA20Q8TB22 786 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ADAMTS18Q8TE60 1221 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FBF1Q8TES7 1133 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZCCHC13Q8WW36 166 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNRF4Q8WWF5 429 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ASB15Q8WXK1 588 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 THAP4Q8WY91 577 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SNX19Q92543 992 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 AKAP1Q92667 903 aaKnown RBP eCLIP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CD101Q93033 1021 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TAAR8Q969N4 342 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 E2F7Q96AV8 911 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MOCOSQ96EN8 888 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ADGRG7Q96K78 797 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 C18orf12Q96KH6 178 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 POM121L2Q96KW2 1035 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 LRR1Q96L50 414 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 C17orf77Q96MU5 243 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KLHL32Q96NJ5 620 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 AGAP3Q96P47 875 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FYTTD1Q96QD9 318 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SNX18Q96RF0 628 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CITED4Q96RK1 184 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FIZ1Q96SL8 496 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 IWS1Q96ST2 819 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PNKPQ96T60 521 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CDC5LQ99459 802 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FOXB1Q99853 325 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MACROD1Q9BQ69 325 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MGME1Q9BQP7 344 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GPATCH1Q9BRR8 931 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PIMREGQ9BSJ6 248 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms