RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C17orf50Q8WW18 174 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 CCDC106Q9BWC9 280 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 BHMT2Q9H2M3 363 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 SPATA7Q9P0W8 599 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 CASQ2O14958 399 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 PIAS1O75925 651 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 GH2P01242 217 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 CD48P09326 243 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 ZSCAN5DPP0CG00 497 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 GAP43P17677 238 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 COG7P83436 770 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 HIC1Q14526 733 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 GCNAQ96QF7 691 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 AGPAT3Q9NRZ7 376 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 TMEM247A6NEH6 219 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ALDH2P05091 517 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 PMLP29590 882 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 HOXD12P35452 270 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 MTTPP55157 894 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 SLC30A10Q6XR72 485 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CDAN1Q8IWY9 1227 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 SLFN12Q8IYM2 578 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 PCDHGB4Q9UN71 923 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNF148Q9UQR1 794 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 PCDHGB5Q9Y5G0 923 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CLUHO75153 1309 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CCNT2O60583 730 aaKnown RBP15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CENPUQ71F23 418 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNF410Q86VK4 478 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ANKMY2Q8IV38 441 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ERMNQ8TAM6 284 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 TTC17Q96AE7 1141 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 STK24Q9Y6E0 443 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 SH3PXD2BA1X283 911 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ARHGAP42A6NI28 874 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 KLF11O14901 512 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 LPXNO60711 386 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 BANF1O75531 89 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 BMP3P12645 472 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ATP6V1B1P15313 513 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ALOX15P16050 662 aaPredicted RBP15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 DLG4P78352 724 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 MTMR2Q13614 643 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 TFDP1Q14186 410 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CLEC16AQ2KHT3 1053 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ABCB5Q2M3G0 1257 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ISLR2Q6UXK2 745 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CROCCP3Q8IVE0 287 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ABHD8Q96I13 439 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 FAM111AQ96PZ2 611 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 CSRNP1Q96S65 589 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 SOX13Q9UN79 622 aa15.3■□□□□ 0.04
VPS9D1-201ENST00000389386 NFASCO94856 1347 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CYP3A7-CYP3A51PA0A087WV96 503 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 DENND3A2RUS2 1198 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CAPN8A6NHC0 703 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 PRR5-ARHGAP8B1AHC4 643 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 H3BSA7 217 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 DNAJA2O60884 412 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CYP3A7P24462 503 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ECE1P42892 770 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ARHGAP8P85298 464 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 PTP4A2Q12974 167 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 TBCCQ15814 346 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 MYCT1Q8N699 235 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 DCAKDQ8WVC6 231 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 MBOAT7Q96N66 472 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CEPT1Q9Y6K0 416 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 EMSYQ7Z589 1322 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 MEI4A8MW99 385 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 WDR46O15213 610 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 NDUFB10O96000 172 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ETS1P14921 441 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 SSTR1P30872 391 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 PSMD7P51665 324 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 CLCN2P51788 898 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 GPS1Q13098 491 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 GRAMD1BQ3KR37 738 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 EPC2Q52LR7 807 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 GRAMD4Q6IC98 578 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ACAD10Q6JQN1 1059 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 PATL1Q86TB9 770 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms