RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 MTFMTQ96DP5 389 aaKnown RBP16.07■□□□□ 0.16
ALK-201ENST00000389048 MED8Q96G25 268 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 TMEM120AQ9BXJ8 343 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 WDR62O43379 1518 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 TSPAN3O60637 253 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 DENND1BQ6P3S1 775 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 FIG4Q92562 907 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 PHF20Q9BVI0 1012 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 DDX18Q9NVP1 670 aaKnown RBP16.07■□□□□ 0.16
ALK-201ENST00000389048 RPS6KB2Q9UBS0 482 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 ATP10AO60312 1499 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 NUP62P37198 522 aaPredicted RBP16.07■□□□□ 0.16
ALK-201ENST00000389048 AQP5P55064 265 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 CNTN1Q12860 1018 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 BMPR2Q13873 1038 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 TCEA2Q15560 299 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 SCUBE1Q8IWY4 988 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 HPS5Q9UPZ3 1129 aa16.07■□□□□ 0.16
ALK-201ENST00000389048 STAU1O95793 577 aaKnown RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 RRM2P31350 389 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 PTK6Q13882 451 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 HPDLQ96IR7 371 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 ZNF333Q96JL9 665 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 DCUN1D5Q9BTE7 237 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 GNG14A0A1W2PPG7 69 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 FAM20BO75063 409 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 KRT16P08779 473 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 CACHD1Q5VU97 1274 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 IZUMO2Q6UXV1 221 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 STKLD1Q8NE28 680 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 EXD1Q8NHP7 514 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 TMEM79Q9BSE2 394 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 PCDHB7Q9Y5E2 793 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 RPS6KL1Q9Y6S9 549 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 NPEPPSP55786 919 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 KCNB1Q14721 858 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 FAM83EQ2M2I3 478 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.06■□□□□ 0.16
ALK-201ENST00000389048 MIEF2Q96C03 454 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 ILKAPQ9H0C8 392 aaPredicted RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 ISCUQ9H1K1 167 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 DIABLOQ9NR28 239 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 TRPC5OSA6NMA1 111 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 TRAPPC3O43617 180 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 SOAT2O75908 522 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 C16orf72Q14CZ0 275 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 CNGA2Q16280 664 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 FGFR3P22607 806 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 MAPK9P45984 424 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 PSMD7P51665 324 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
ALK-201ENST00000389048 VPS37AQ8NEZ2 397 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 HIC2Q96JB3 615 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 MPP4Q96JB8 637 aa16.06■□□□□ 0.16
ALK-201ENST00000389048 ATP9AO75110 1047 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 CSHL1Q14406 222 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 CASP10Q92851 521 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 KCTD14Q9BQ13 255 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 ASB14A6NK59 587 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 LTFP02788 710 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 PDPK2PQ6A1A2 396 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 KLHL17Q6TDP4 642 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 PTAR1Q7Z6K3 402 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 ATG16L2Q8NAA4 619 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 ZSCAN18Q8TBC5 510 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 ACOX2Q99424 681 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 MAP10Q9P2G4 905 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 IQCMA0A1B0GVH7 501 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 ERI2A8K979 691 aaKnown RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 PEX1O43933 1283 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 FOXO4P98177 505 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 NEDD8Q15843 81 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 ARMCX4Q5H9R4 360 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 ZNF57Q68EA5 555 aaPredicted RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 RNF148Q8N7C7 305 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 TMEM121Q9BTD3 319 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 C1orf232A0A0U1RR37 186 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 A8MX80 341 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 ASS1P00966 412 aaKnown RBP16.05■□□□□ 0.16
ALK-201ENST00000389048 ALDH1A3P47895 512 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 TSC22D1Q15714 1073 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 SV2CQ496J9 727 aa16.05■□□□□ 0.16
ALK-201ENST00000389048 NECAB2Q7Z6G3 386 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms