RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZBTB41Q5SVQ8 909 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 SNX30Q5VWJ9 437 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 TTC8Q8TAM2 541 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 CHMP2BQ9UQN3 213 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 COPEO14579 308 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 SLC12A2P55011 1212 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 GSCP56915 257 aaPredicted RBP19.67■□□□□ 0.74
CSPG5-202ENST00000383738 AP1B1Q10567 949 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 NIPA1Q7RTP0 329 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 SREK1Q8WXA9 508 aaKnown RBP19.67■□□□□ 0.74
CSPG5-202ENST00000383738 MYLK2Q9H1R3 596 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 IP6K2Q9UHH9 426 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 MAP1BP46821 2468 aaKnown RBP19.67■□□□□ 0.74
CSPG5-202ENST00000383738 CACNA2D1P54289 1103 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 TRIML2Q8N7C3 387 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 CCT6BQ92526 530 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 TEPSINQ96N21 525 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 GAD1Q99259 594 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 NAALADL1Q9UQQ1 740 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 RIPK2O43353 540 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
CSPG5-202ENST00000383738 FNTAP49354 379 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 CLK2P49760 499 aaKnown RBP19.66■□□□□ 0.74
CSPG5-202ENST00000383738 MGAT5BQ3V5L5 792 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 RNF220Q5VTB9 566 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 LLGL2Q6P1M3 1020 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 NT5DC3Q86UY8 548 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 USP33Q8TEY7 942 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 MAGEA4P43358 317 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 SLC13A5Q86YT5 568 aaPredicted RBP19.66■□□□□ 0.74
CSPG5-202ENST00000383738 TRAIPQ9BWF2 469 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 ATP11BQ9Y2G3 1177 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 NEU2Q9Y3R4 380 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 NOL3O60936 208 aaKnown RBP19.66■□□□□ 0.74
CSPG5-202ENST00000383738 RFX1P22670 979 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 DNAJB2P25686 324 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 TRIP10Q15642 601 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 PGLYRP2Q96PD5 576 aa19.66■□□□□ 0.74
CSPG5-202ENST00000383738 LMNAP02545 664 aaKnown RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 PYGMP11217 842 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 RARGP13631 454 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 NCALDP61601 193 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 FAXCQ5TGI0 409 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 RXFP1Q9HBX9 757 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 VTA1Q9NP79 307 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 LZTS1Q9Y250 596 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 PCDHGC5Q9Y5F6 944 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 AKR1A1P14550 325 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 ZNF200P98182 395 aaPredicted RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 JADE1Q6IE81 842 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 MCUQ8NE86 351 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 LPPQ93052 612 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 NUDT5Q9UKK9 219 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 CCDC22O60826 627 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 GSTA1P08263 222 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 RALAP11233 206 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 VHLP40337 213 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 AP3M2P53677 418 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 MAP4K3Q8IVH8 894 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 RBM41Q96IZ5 413 aaKnown RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 TSSK1BQ9BXA7 367 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 ACKR2O00590 384 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 XRCC4Q13426 336 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 TMEM259Q4ZIN3 620 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 BTBD8Q5XKL5 378 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 TRMT10CQ7L0Y3 403 aaKnown RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 SPOCK2Q92563 424 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 MTBPQ96DY7 904 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 KCTD10Q9H3F6 313 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 ERVK-5Q9HDB9 667 aa19.65■□□□□ 0.74
CSPG5-202ENST00000383738 DIS3Q9Y2L1 958 aaKnown RBP19.65■□□□□ 0.74
CSPG5-202ENST00000383738 KIAA0391O15091 583 aaKnown RBP19.64■□□□□ 0.74
CSPG5-202ENST00000383738 TMEM253P0C7T8 217 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 PSEN2P49810 448 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 PTENP60484 403 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 MMEL1Q495T6 779 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 BRI3BPQ8WY22 251 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 LENG9Q96B70 501 aa19.64■□□□□ 0.74
CSPG5-202ENST00000383738 PJA2O43164 708 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 CST8O60676 142 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 KCNA2P16389 499 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 SP2Q02086 613 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 LMNB2Q03252 620 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 CNGA2Q16280 664 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 ARL13BQ3SXY8 428 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 SPATA2LQ8IUW3 424 aaPredicted RBP19.64■□□□□ 0.73
CSPG5-202ENST00000383738 GRAMD1AQ96CP6 724 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 ATXN7L3BQ96GX2 97 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 TRIM56Q9BRZ2 755 aaKnown RBP19.64■□□□□ 0.73
CSPG5-202ENST00000383738 WNT8AQ9H1J5 351 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 CCL14Q16627 93 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 ZNF606Q8WXB4 792 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 CGRRF1Q99675 332 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 TELO2Q9Y4R8 837 aa19.64■□□□□ 0.73
CSPG5-202ENST00000383738 TAF6P49848 677 aa19.63■□□□□ 0.73
CSPG5-202ENST00000383738 AP2B1P63010 937 aa19.63■□□□□ 0.73
CSPG5-202ENST00000383738 MIB1Q86YT6 1006 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms