RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 AKR1A1P14550 325 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 CYP2B6P20813 491 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 MIPP30301 263 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 SCNN1AP37088 669 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 GUCY1A3Q02108 690 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 MORF4L2Q15014 288 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 FSCN1Q16658 493 aaKnown RBP24.25■■□□□ 1.47
VPS16-201ENST00000380443 FBXO47Q5MNV8 452 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 OR6B2Q6IFH4 312 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 SESTD1Q86VW0 696 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 VSIG1Q86XK7 387 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 CRYBG2Q8N1P7 616 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 TMEM130Q8N3G9 435 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 KCTD6Q8NC69 237 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 MRPL45Q9BRJ2 306 aaKnown RBP24.25■■□□□ 1.47
VPS16-201ENST00000380443 TUBGCP4Q9UGJ1 667 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 TPX2Q9ULW0 747 aaKnown RBP24.25■■□□□ 1.47
VPS16-201ENST00000380443 SMAPO00193 183 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 RPLP2P05387 115 aaKnown RBP24.24■■□□□ 1.47
VPS16-201ENST00000380443 IL1R2P27930 398 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 P3H1Q32P28 736 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 TAOK1Q7L7X3 1001 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 SPATS2Q86XZ4 545 aaKnown RBP24.24■■□□□ 1.47
VPS16-201ENST00000380443 EMC1Q8N766 993 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 C7orf31Q8N865 590 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 CCDC77Q9BR77 488 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 PHACTR1Q9C0D0 580 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 NXF3Q9H4D5 531 aaKnown RBP24.24■■□□□ 1.47
VPS16-201ENST00000380443 SMIM28A0A1B0GU29 152 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 FKTNO75072 461 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 DUSP11O75319 330 aaKnown RBP24.24■■□□□ 1.47
VPS16-201ENST00000380443 ENDOD1O94919 500 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 CHKAP35790 457 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 CCL14Q16627 93 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 BOLA3Q53S33 107 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 PPP1R26Q5T8A7 1209 aaPredicted RBP24.24■■□□□ 1.47
VPS16-201ENST00000380443 FAM183BPQ6ZVS7 135 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 ARCQ7LC44 396 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 SLC35F5Q8WV83 523 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 TTC25Q96NG3 672 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 FAM107BQ9H098 131 aa24.24■■□□□ 1.47
VPS16-201ENST00000380443 E5RJQ4 531 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 TNPO2O14787 897 aaKnown RBP24.23■■□□□ 1.47
VPS16-201ENST00000380443 ABHD2P08910 425 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 PDGFRAP16234 1089 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 ARSEP51690 589 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 PURAQ00577 322 aaKnown RBP24.23■■□□□ 1.47
VPS16-201ENST00000380443 HIC1Q14526 733 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 PDCD11Q14690 1871 aaKnown RBP24.23■■□□□ 1.47
VPS16-201ENST00000380443 SV2CQ496J9 727 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 UBXN11Q5T124 520 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 B4GALNT4Q76KP1 1039 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 DPH6Q7L8W6 267 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 LIMS2Q7Z4I7 341 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 MAP7D3Q8IWC1 876 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 ZNF296Q8WUU4 475 aaPredicted RBP24.23■■□□□ 1.47
VPS16-201ENST00000380443 RXFP2Q8WXD0 754 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 TBCBQ99426 244 aa24.23■■□□□ 1.47
VPS16-201ENST00000380443 DOCK3Q8IZD9 2030 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 TLDC2A0PJX2 215 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 EBAG9O00559 213 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 CST8O60676 142 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 MMP13P45452 471 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 SLC6A3Q01959 620 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 SP3Q02447 781 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 TFDP2Q14188 446 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 PDK2Q15119 407 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 SOWAHAQ2M3V2 549 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 FAM47CQ5HY64 1035 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 ACOT1Q86TX2 421 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 OR6B3Q8NGW1 331 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 TEKT4Q8WW24 435 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 C18orf25Q96B23 403 aaPredicted RBP24.22■■□□□ 1.47
VPS16-201ENST00000380443 SHOC2Q9UQ13 582 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 TRIP11Q15643 1979 aa24.22■■□□□ 1.47
VPS16-201ENST00000380443 A8MXQ7 604 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 KPNA7A9QM74 516 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 APOC4-APOC2K7ER74 178 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 NDUFAB1O14561 156 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 APOC2P02655 101 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 ACADSBP45954 432 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 TAF6P49848 677 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 PLCB3Q01970 1234 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 AUHQ13825 339 aaKnown RBP24.21■■□□□ 1.47
VPS16-201ENST00000380443 STAT4Q14765 748 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 TTC19Q6DKK2 380 aaPredicted RBP24.21■■□□□ 1.47
VPS16-201ENST00000380443 C12orf29Q8N999 325 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 FAM118BQ9BPY3 351 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 HES2Q9Y543 173 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 PPEF2O14830 753 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 PRPSAP2O60256 369 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 RPL34P49207 117 aaKnown RBP24.21■■□□□ 1.47
VPS16-201ENST00000380443 VPS41P49754 854 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 OLFML1Q6UWY5 402 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 TTC30AQ86WT1 665 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 ANKRD52Q8NB46 1076 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 ACTL9Q8TC94 416 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 TMEM40Q8WWA1 233 aa24.21■■□□□ 1.47
VPS16-201ENST00000380443 MTG1Q9BT17 334 aaPredicted RBP24.21■■□□□ 1.47
VPS16-201ENST00000380443 MAK16Q9BXY0 300 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms