RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RDH13Q8NBN7 331 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 GLIS3Q8NEA6 775 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 CCDC26Q8TAB7 109 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 SPATA17Q96L03 361 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 SNX25Q9H3E2 840 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 HSPBP1Q9NZL4 362 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 CIZ1Q9ULV3 898 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-202ENST00000380276 HELZP42694 1942 aaKnown RBP24.68■■□□□ 1.54
U2AF1-202ENST00000380276 ANAPC1Q9H1A4 1944 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 MYO16Q9Y6X6 1858 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 CACNA1BQ00975 2339 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 LEFTY2O00292 366 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 SCAMP3O14828 347 aaKnown RBP24.67■■□□□ 1.54
U2AF1-202ENST00000380276 TRIM66O15016 1216 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 CLSTN1O94985 981 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 CAVIN2O95810 425 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 DLATP10515 647 aaKnown RBP24.67■■□□□ 1.54
U2AF1-202ENST00000380276 WARSP23381 471 aaKnown RBP24.67■■□□□ 1.54
U2AF1-202ENST00000380276 USP46P62068 366 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 ANO7Q6IWH7 933 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 CCDC33Q8N5R6 958 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 OR6B3Q8NGW1 331 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 FOXD4L1Q9NU39 408 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 EHD2Q9NZN4 543 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 KIAA1549LQ6ZVL6 1849 aa24.67■■□□□ 1.54
U2AF1-202ENST00000380276 TNNI1P19237 187 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 STK38Q15208 465 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 USP39Q53GS9 565 aaKnown RBP24.66■■□□□ 1.54
U2AF1-202ENST00000380276 FILIP1Q7Z7B0 1213 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 WDR49Q8IV35 697 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 PCED1BQ96HM7 432 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 FNBP1Q96RU3 617 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 MRPL45Q9BRJ2 306 aaKnown RBP24.66■■□□□ 1.54
U2AF1-202ENST00000380276 SMPD4Q9NXE4 827 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 EBF1Q9UH73 591 aa24.66■■□□□ 1.54
U2AF1-202ENST00000380276 F8VP50 259 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 TM4SF5O14894 197 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 TCF3P15923 654 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 ASIC1P78348 528 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 SLC39A14Q15043 492 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 PSAPL1Q6NUJ1 521 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 TRAPPC11Q7Z392 1133 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 USP33Q8TEY7 942 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 LRRC27Q9C0I9 530 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 KIAA1586Q9HCI6 787 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 CPQQ9Y646 472 aa24.65■■□□□ 1.54
U2AF1-202ENST00000380276 TPRP12270 2363 aaKnown RBP24.64■■□□□ 1.54
U2AF1-202ENST00000380276 KCNK5O95279 499 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 PMLP29590 882 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 GNL1P36915 607 aaPredicted RBP24.64■■□□□ 1.54
U2AF1-202ENST00000380276 OPRD1P41143 372 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 CYP2J2P51589 502 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 TNNC1P63316 161 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 MYCBPAPQ8TBZ2 947 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 CCDC127Q96BQ5 260 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 LSM14BQ9BX40 385 aaKnown RBP24.64■■□□□ 1.54
U2AF1-202ENST00000380276 TNMDQ9H2S6 317 aa24.64■■□□□ 1.54
U2AF1-202ENST00000380276 BCLAF3A2AJT9 711 aaKnown RBP24.63■■□□□ 1.53
U2AF1-202ENST00000380276 ANTXRLA6NF34 631 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 K7EQS6 105 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 CYP17A1P05093 508 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
U2AF1-202ENST00000380276 PFKLP17858 780 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 ZXDBP98169 803 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 TDRD10Q5VZ19 366 aaKnown RBP24.63■■□□□ 1.53
U2AF1-202ENST00000380276 CYP2U1Q7Z449 544 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 C11orf74Q86VG3 221 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 DHX58Q96C10 678 aa24.63■■□□□ 1.53
U2AF1-202ENST00000380276 ACACBO00763 2458 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 ZNF840PA6NDX5 716 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 C4orf47A7E2U8 309 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 CLIC2O15247 247 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 MBL2P11226 248 aaPredicted RBP24.62■■□□□ 1.53
U2AF1-202ENST00000380276 DHPSP49366 369 aaPredicted RBP24.62■■□□□ 1.53
U2AF1-202ENST00000380276 NOVA1P51513 510 aaKnown RBP24.62■■□□□ 1.53
U2AF1-202ENST00000380276 SNRNP35Q16560 246 aaKnown RBP24.62■■□□□ 1.53
U2AF1-202ENST00000380276 LIMS2Q7Z4I7 341 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 NELFCDQ8IXH7 590 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 CEP295NLQ96MC4 621 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 SLITRK1Q96PX8 696 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 RNF38Q9H0F5 515 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 CFAP97Q9P2B7 532 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 MMP17Q9ULZ9 603 aa24.62■■□□□ 1.53
U2AF1-202ENST00000380276 SLC9A3R1O14745 358 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 KHNYNO15037 678 aaKnown RBP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 ALDH1A2O94788 518 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 CST3P01034 146 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 TIE1P35590 1138 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 PPP3CCP48454 512 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 SLC7A9P82251 487 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 AMPD3Q01432 767 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 TAF10Q12962 218 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 TRPC3Q13507 836 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 DHCR24Q15392 516 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 WDR72Q3MJ13 1102 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 DAB2IPQ5VWQ8 1189 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 PMS2CLQ68D20 193 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 C8orf48Q96LL4 319 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 CGRRF1Q99675 332 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 TTLL2Q9BWV7 592 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms