RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GATMP50440 423 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 FCGRTP55899 365 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 TMPRSS15P98073 1019 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 OLIG2Q13516 323 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 FASTKD3Q14CZ7 662 aaKnown RBP8.49□□□□□ -1.05
CKAP2-203ENST00000378037 TCEA2Q15560 299 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 KCNA10Q16322 511 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 DDR2Q16832 855 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 ANO4Q32M45 955 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 KCNV1Q6PIU1 500 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 CRELD2Q6UXH1 353 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-203ENST00000378037 CCDC121Q6ZUS5 278 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 ZMAT2Q96NC0 199 aaKnown RBP8.49□□□□□ -1.05
CKAP2-203ENST00000378037 PRMT1Q99873 361 aaKnown RBP8.49□□□□□ -1.05
CKAP2-203ENST00000378037 ZCWPW1Q9H0M4 648 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 SAMD15Q9P1V8 674 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 CAPN7Q9Y6W3 813 aa8.49□□□□□ -1.05
CKAP2-203ENST00000378037 CNTNAP2Q9UHC6 1331 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 KPNA7A9QM74 516 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 AXIN1O15169 862 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CPP00450 1065 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 C4BPAP04003 597 aaKnown RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 TFE3P19532 575 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CPT1AP50416 773 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 MNAT1P51948 309 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 SESN3P58005 492 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 DUSP28Q4G0W2 176 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 DCAF12L1Q5VU92 463 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CHADLQ6NUI6 762 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PMF1Q6P1K2 205 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 EMBQ6PCB8 327 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 NIPA1Q7RTP0 329 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 MAP7D3Q8IWC1 876 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 SLC25A41Q8N5S1 370 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 TBC1D31Q96DN5 1066 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 SGF29Q96ES7 293 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PDZD7Q9H5P4 517 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 C17orf75Q9HAS0 396 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 DMAC2Q9NW81 257 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 USP18Q9UMW8 372 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 NEU2Q9Y3R4 380 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 MIF4GDA9UHW6 222 aaKnown RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PMPCBO75439 489 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 INHBAP08476 426 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ARL2P36404 184 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 TAF6P49848 677 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CLCNKBP51801 687 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 TKTL1P51854 596 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PGGT1BP53609 377 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 NOMO3P69849 1222 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PITX1P78337 314 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ITIH3Q06033 890 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 BMT2Q1RMZ1 405 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 MROH9Q5TGP6 573 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 RAPH1Q70E73 1250 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 WDR49Q8IV35 697 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ATAD1Q8NBU5 361 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 RILPQ96NA2 401 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 WNT8AQ9H1J5 351 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 VPS33BQ9H267 617 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CERS4Q9HA82 394 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 FAM114A2Q9NRY5 505 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 A0A0G2JND7 137 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 C22orf31O95567 290 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ASS1P00966 412 aaKnown RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 HMGCRP04035 888 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ERBB2P04626 1255 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 THP07101 528 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 GNAT1P11488 350 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ATXN3P54252 364 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-203ENST00000378037 MBTD1Q05BQ5 628 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 SNX17Q15036 470 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 FAM183BPQ6ZVS7 135 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 METTL23Q86XA0 190 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 VSIG1Q86XK7 387 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 DEFB106AQ8N104 65 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PDIK1LQ8N165 341 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 RDM1Q8NG50 284 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 NAT14Q8WUY8 206 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 RSPH1Q8WYR4 309 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PGBD4Q96DM1 585 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 LGMNQ99538 433 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CALCOCO1Q9P1Z2 691 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 SFMBT1Q9UHJ3 866 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 ZNF112Q9UJU3 913 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
CKAP2-203ENST00000378037 CCDC188H7C350 402 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 STRNO43815 780 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 TSPAN1O60635 241 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PHF2O75151 1096 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PIRTP0C851 137 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 AKR1A1P14550 325 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CTCFP49711 727 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 DEUP1Q05D60 604 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SLC27A1Q6PCB7 646 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 MYLK4Q86YV6 388 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms