RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GCNAQ96QF7 691 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 KCNK16Q96T55 309 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 NAA15Q9BXJ9 866 aaKnown RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 STK33Q9BYT3 514 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF334Q9HCZ1 680 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 HESX1Q9UBX0 185 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 MYH10P35580 1976 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 C2CD4DB7Z1M9 353 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 PPP3CCP48454 512 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 MEA1Q16626 185 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 ARHGAP15Q53QZ3 475 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 FGF13Q92913 245 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.17
CKAP2-202ENST00000378034 MYADMQ96S97 322 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 GANQ9H2C0 597 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 IL21Q9HBE4 155 aa14.02□□□□□ -0.17
CKAP2-202ENST00000378034 MAGED2Q9UNF1 606 aaPredicted RBP14.02□□□□□ -0.17
CKAP2-202ENST00000378034 PATJQ8NI35 1801 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 A0A1W2PQC6 194 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 O00370 1275 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 TNFRSF10BO14763 440 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 MED7O43513 233 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 MOSPD3O75425 235 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 F11P03951 625 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 LAMP2P13473 410 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 GABRR2P28476 465 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 CCR2P41597 374 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 BCAT1P54687 386 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 MAP3K7CLP57077 242 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 BPIFB4P59827 614 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 FANCCQ00597 558 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 GAREM2Q75VX8 874 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 NPAS3Q8IXF0 933 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 FAM71AQ8IYT1 594 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 GJD3Q8N144 294 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 ZMIZ2Q8NF64 920 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 SHKBP1Q8TBC3 707 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 NXPE3Q969Y0 559 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 TCEAL4Q96EI5 215 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 FAM207AQ9NSI2 230 aaPredicted RBP14.01□□□□□ -0.17
CKAP2-202ENST00000378034 IL37Q9NZH6 218 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 TSPAN16Q9UKR8 245 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
CKAP2-202ENST00000378034 A0A1W2PRU2 124 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 FOXN3O00409 490 aaPredicted RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 BEST1O76090 585 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 CEBPBP17676 345 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 DDX6P26196 483 aaKnown RBP eCLIP14□□□□□ -0.17
CKAP2-202ENST00000378034 USP8P40818 1118 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 PTK2Q05397 1052 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 BST2Q10589 180 aaKnown RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 RAPGEF1Q13905 1077 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 DRAP1Q14919 205 aaPredicted RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 NR1I3Q14994 352 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 GOLGA7BQ2TAP0 167 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 TFAP2BQ92481 460 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 AJAP1Q9UKB5 411 aaPredicted RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 WDR3Q9UNX4 943 aaKnown RBP eCLIP14□□□□□ -0.17
CKAP2-202ENST00000378034 UNC80Q8N2C7 3258 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 DOCK8Q8NF50 2099 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 TEX33O43247 280 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 SETSIPP0DME0 302 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 YWHAQP27348 245 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 GNA15P30679 374 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 KLK7P49862 253 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 SLC5A3P53794 718 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 PDZD8Q8NEN9 1154 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 MRPS31Q92665 395 aaKnown RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 NAP1L5Q96NT1 182 aaPredicted RBP14□□□□□ -0.17
CKAP2-202ENST00000378034 SLITRK1Q96PX8 696 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 IGSF9Q9P2J2 1179 aa14□□□□□ -0.17
CKAP2-202ENST00000378034 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 ZNF638Q14966 1978 aaKnown RBP13.99□□□□□ -0.17
CKAP2-202ENST00000378034 NCANO14594 1321 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 FAM92AA1XBS5 289 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 HHLA1C9JL84 531 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
CKAP2-202ENST00000378034 PFKLP17858 780 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 SP100P23497 879 aaPredicted RBP13.99□□□□□ -0.17
CKAP2-202ENST00000378034 BRD2P25440 801 aaKnown RBP13.99□□□□□ -0.17
CKAP2-202ENST00000378034 WEE1P30291 646 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 UBASH3AP57075 661 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 POLR2FP61218 127 aaKnown RBP13.99□□□□□ -0.17
CKAP2-202ENST00000378034 TEAD2Q15562 447 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 PKDCCQ504Y2 493 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 MTSS1LQ765P7 747 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 TTC30AQ86WT1 665 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 ZNF606Q8WXB4 792 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms