RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 FAIMQ9NVQ4 179 aa16.36■□□□□ 0.21
CSNK1A1-202ENST00000377843 TCRBV7S3A2A0A539 114 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 NDC80O14777 642 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 TBX3O15119 743 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 STRNO43815 780 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 CCNT2O60583 730 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 APBA3O96018 575 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 IFNB1P01574 187 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 SLC18A2Q05940 514 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 PPIDQ08752 370 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 MOXD1Q6UVY6 613 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 RHPN2Q8IUC4 686 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 RHOT1Q8IXI2 618 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 BTBD9Q96Q07 612 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 PFDN4Q9NQP4 134 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 FETUBQ9UGM5 382 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 SHOC2Q9UQ13 582 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 CYB561D2O14569 222 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 CASQ2O14958 399 aaPredicted RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 SERPINB6P35237 376 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 COG7P83436 770 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 GSTM4Q03013 218 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 LPIN1Q14693 890 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 ACAP1Q15027 740 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 IYDQ6PHW0 289 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 IGDCC3Q8IVU1 814 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 DAW1Q8N136 415 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 ATP11CQ8NB49 1132 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 PIP4K2CQ8TBX8 421 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 FAM84AQ96KN4 292 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 MRPL1Q9BYD6 325 aaKnown RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 SHCBP1LQ9BZQ2 653 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 FARP1Q9Y4F1 1045 aaPredicted RBP16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 CEPT1Q9Y6K0 416 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 UBE4BO95155 1302 aa16.35■□□□□ 0.21
CSNK1A1-202ENST00000377843 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 KLF11O14901 512 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 P4HA2O15460 535 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 DENRO43583 198 aaKnown RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 PSTPIP1O43586 416 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 ADRB2P07550 413 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 ZNF24P17028 368 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 MFAP3P55082 362 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 RHBDL3P58872 404 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 PTK7Q13308 1070 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 TCHHL1Q5QJ38 904 aaPredicted RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 RABGAP1LQ5R372 815 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 OGFRL1Q5TC84 451 aaPredicted RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 PGM2L1Q6PCE3 622 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 MFSD7Q6UXD7 560 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 DCUN1D1Q96GG9 259 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 IQCGQ9H095 443 aaKnown RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 DTNAQ9Y4J8 743 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 E9PBE3 544 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 FAM155BO75949 473 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 ATF7P17544 494 aaPredicted RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 OXCT1P55809 520 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 GSTO1P78417 241 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 PEX6Q13608 980 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 OASLQ15646 514 aaKnown RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 TEX44Q53QW1 395 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 HPS6Q86YV9 775 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 BBS5Q8N3I7 341 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 EXD1Q8NHP7 514 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 ACSF2Q96CM8 615 aaPredicted RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 C7orf26Q96N11 449 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 PRPF18Q99633 342 aaKnown RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 MRPS26Q9BYN8 205 aaKnown RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 WWP1Q9H0M0 922 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 AVENQ9NQS1 362 aaPredicted RBP16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
CSNK1A1-202ENST00000377843 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.215e-6■■■■■ 32.2
CSNK1A1-202ENST00000377843 TRIM43BA6NCK2 446 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 ATP2A1O14983 1001 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CFHP08603 1231 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 COL6A2P12110 1019 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CDH2P19022 906 aaPredicted RBP16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 STT3AP46977 705 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 RPL26P61254 145 aaKnown RBP16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 APOFQ13790 326 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 KLHL38Q2WGJ6 581 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 Q6ZNX1 250 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CPT1BQ92523 772 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CNBD2Q96M20 576 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 FAM20AQ96MK3 541 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 RILPQ96NA2 401 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 SRPK1Q96SB4 655 aaKnown RBP16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CORO1BQ9BR76 489 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms