RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 ZSWIM2Q8NEG5 633 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 OR6P1Q8NGX9 317 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 MID2Q9UJV3 735 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 AP4E1Q9UPM8 1137 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 C2CD2Q9Y426 696 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 C3orf70A6NLC5 250 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-202ENST00000377797 ZNF235Q14590 738 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 ATG16L1Q676U5 607 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 OVOS1Q6IE37 1185 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 RAPGEF5Q92565 580 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 KLHL29Q96CT2 875 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
TCOF1-202ENST00000377797 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 ADAMTS7Q9UKP4 1686 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 ARHGAP42A6NI28 874 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 NLRP14Q86W24 1093 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 PRRG1O14668 218 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 CNGA2Q16280 664 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 DEFB115Q30KQ5 88 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 AADACL2Q6P093 401 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 SLFN11Q7Z7L1 901 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 CHMP6Q96FZ7 201 aa15.13■□□□□ 0.01
TCOF1-202ENST00000377797 SMAPO00193 183 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TYK2P29597 1187 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ADSSP30520 456 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ADIGQ0VDE8 80 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 MAML1Q92585 1016 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 SEPT8Q92599 483 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 FAM129AQ9BZQ8 928 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 F9P00740 461 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 HSPA9P38646 679 aaKnown RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 NOMO3P69849 1222 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 AMPD2Q01433 879 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TMEM169Q96HH4 297 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TTC1Q99614 292 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 DSEQ9UL01 958 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 RBAK-RBAKDNI3L0D1 243 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 CST3P01034 146 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 CYP1A2P05177 515 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 MYH7P12883 1935 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 RARGP13631 454 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TJP1Q07157 1748 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 AGBL2Q5U5Z8 902 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 C4orf33Q8N1A6 199 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 HELQQ8TDG4 1101 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 HDAC11Q96DB2 347 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 SENP8Q96LD8 212 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 A0A0G2JND7 137 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ZNF189O75820 626 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 MLH1P40692 756 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 C10orf120Q5SQS8 335 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ATXN7L3BQ96GX2 97 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 MAGEB5Q9BZ81 275 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ROPN1BQ9BZX4 212 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 ROPN1Q9HAT0 212 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-202ENST00000377797 WHRNQ9P202 907 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
TCOF1-202ENST00000377797 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 RFC1P35251 1148 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 MARCKSL1P49006 195 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 SCNN1GP51170 649 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 PRAMEP78395 509 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 CTXN3Q4LDR2 81 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 TADA2BQ86TJ2 420 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 ARL8AQ96BM9 186 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 RAB3IPQ96QF0 476 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 PCDHB18PQ96TA0 734 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 NCANO14594 1321 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 GMNNO75496 209 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 FBXO21O94952 628 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 MIPP30301 263 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 YWHAHQ04917 246 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 MIB1Q86YT6 1006 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 TFB1MQ8WVM0 346 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 TRIM55Q9BYV6 548 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 PFDN4Q9NQP4 134 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 CCDC130P13994 396 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 SMPD1P17405 629 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 YWHAZP63104 245 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 MRPS6P82932 125 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 PCBP1Q15365 356 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 TSHZ1Q6ZSZ6 1077 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 RAB44Q7Z6P3 723 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 CATSPERBQ9H7T0 1116 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 FIS1Q9Y3D6 152 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 B4GALT4O60513 344 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 PQBP1O60828 265 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 C4BPAP04003 597 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms