RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ACVR2BQ13705 512 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 HIC1Q14526 733 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 INPP5AQ14642 412 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TLR8Q9NR97 1041 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 VPS9D1Q9Y2B5 631 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 REREQ9P2R6 1566 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 ENO3P13929 434 aaPredicted RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 CHN1P15882 459 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TGM2P21980 687 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 FSCN1Q16658 493 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 MRPL1Q9BYD6 325 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 SPASTQ9UBP0 616 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 GTF3C4Q9UKN8 822 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 VIL1P09327 827 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 RHOAP61586 193 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 CCZ1BP86790 482 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 ELAVL2Q12926 359 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 EMILIN2Q9BXX0 1053 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 ABHD16BQ9H3Z7 469 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 RIOX1Q9H6W3 641 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 CYP11B1P15538 503 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 PSEN2P49810 448 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TKTL1P51854 596 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 BTKQ06187 659 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 CLEC16AQ2KHT3 1053 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 OVOS1Q6IE37 1185 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 ICA1LQ8NDH6 482 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 REPS2Q8NFH8 660 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 ERGIC2Q96RQ1 377 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TFR2Q9UP52 801 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 AAR2Q9Y312 384 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 MYO1GB0I1T2 1018 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PJA2O43164 708 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PPATQ06203 517 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 NAA30Q147X3 362 aaPredicted RBP14.13□□□□□ -0.15
GPC6-201ENST00000377047 FAM171A1Q5VUB5 890 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 B4GALNT2Q8NHY0 566 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 CISHQ9NSE2 258 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ITGA11Q9UKX5 1188 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PLA2G4CQ9UP65 541 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 SMAPO00193 183 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 CBX4O00257 560 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 KCTD10Q9H3F6 313 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 OLFML3Q9NRN5 406 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 KYNUQ16719 465 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ZNF720Q7Z2F6 126 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 STOML1Q9UBI4 398 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PFDN1O60925 122 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 SOAT2O75908 522 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 FKBP9O95302 570 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 VCLP18206 1134 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PGM1P36871 562 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ADCYAP1R1P41586 468 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 SEC23AQ15436 765 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ZNF284Q2VY69 593 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 DACT2Q5SW24 774 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 E4F1Q66K89 784 aaPredicted RBP14.13□□□□□ -0.15
GPC6-201ENST00000377047 CLEC17AQ6ZS10 378 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 FKBP9P1Q75LS8 142 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ANO5Q75V66 913 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 KIRREL3Q8IZU9 778 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 OR2W6PQ8NHA6 318 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
GPC6-201ENST00000377047 PLEKP08567 350 aaPredicted RBP14.13□□□□□ -0.15
GPC6-201ENST00000377047 KPNA1P52294 538 aaPredicted RBP14.13□□□□□ -0.15
GPC6-201ENST00000377047 VGLL4Q14135 290 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 MRNIPQ6NTE8 343 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 FAM131BQ86XD5 332 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 FAM162AQ96A26 154 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 SGF29Q96ES7 293 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PGLYRP2Q96PD5 576 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 NFKBIZQ9BYH8 718 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 UBXN6Q9BZV1 441 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 PCDHB5Q9Y5E4 795 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 FAM205AQ6ZU69 1335 aa14.13□□□□□ -0.15
GPC6-201ENST00000377047 ERFP50548 548 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 BEX3Q00994 111 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 BST2Q10589 180 aaKnown RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 DMC1Q14565 340 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 IFNEQ86WN2 208 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 SENP6Q9GZR1 1112 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 DDX4Q9NQI0 724 aaKnown RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 EFCAB14O75071 495 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 PLD1Q13393 1074 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 PDK2Q15119 407 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 NFE2Q16621 373 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 KAT2BQ92831 832 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 HES6Q96HZ4 224 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms