RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 PRMT2P55345 433 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 ADCY2Q08462 1091 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 MBTPS1Q14703 1052 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 UPP1Q16831 310 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 C15orf59Q2T9L4 293 aaPredicted RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 TRNP1Q6NT89 227 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 TMEM110Q86TL2 294 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 ECHDC2Q86YB7 292 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 C12orf50Q8NA57 414 aaPredicted RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 TSEN2Q8NCE0 465 aaKnown RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 CLEC4CQ8WTT0 213 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 MED10Q9BTT4 135 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 LRRC19Q9H756 370 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 ASNSD1Q9NWL6 643 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 H3BQF6 201 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 POLR3GO15318 223 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 CAND2O75155 1236 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 B3GAT3O94766 335 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 ECEL1O95672 775 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 FNTAP49354 379 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 ZNF143P52747 638 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 ATP11AP98196 1134 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SLC6A3Q01959 620 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SLC25A11Q02978 314 aaKnown RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 KLF1Q13351 362 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 PPP1R7Q15435 360 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 MDH1BQ5I0G3 518 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 DUPD1Q68J44 220 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 OLFML1Q6UWY5 402 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SPOCD1Q6ZMY3 1216 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 RTN4RL1Q86UN2 441 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SLC43A3Q8NBI5 491 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 HSPH1Q92598 858 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 CCDC114Q96M63 670 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 CFAP57Q96MR6 1250 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 DCLK3Q9C098 648 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 VIPAS39Q9H9C1 493 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 C2CD4BA6NLJ0 364 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 GABRDO14764 452 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SKIP12755 728 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 MIPP30301 263 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SNX16P57768 344 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 KIAA0319Q5VV43 1072 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SEC14L1Q92503 715 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 RUNDC3BQ96NL0 473 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 SQORQ9Y6N5 450 aa13.57□□□□□ -0.24
TRIM40-206ENST00000376724 GOLGA6BA6NDN3 693 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 KRT7P08729 469 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 BRCC3P46736 316 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 GRIK3Q13003 919 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 NNTQ13423 1086 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 TRIP13Q15645 432 aaPredicted RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 POLNQ7Z5Q5 900 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 KCTD6Q8NC69 237 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 STK32AQ8WU08 396 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 HAUS1Q96CS2 278 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 CNPY3Q9BT09 278 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 UBXN6Q9BZV1 441 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 UBN1Q9NPG3 1134 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 RGS18Q9NS28 235 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 BEST1O76090 585 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 TJP3O95049 919 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 GGCXP38435 758 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 RPL21P46778 160 aaKnown RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 LHX1P48742 406 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 RABGGTBP53611 331 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 PLTPP55058 493 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 SLC8A3P57103 927 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 DYNLT1P63172 113 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 KRT17Q04695 432 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 MTFR1Q15390 333 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 CCDC14Q49A88 953 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 HSP90B2PQ58FF3 399 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 ZNF598Q86UK7 904 aaKnown RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 EIF1ADQ8N9N8 165 aaKnown RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 DEFB118Q96PH6 123 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
TRIM40-206ENST00000376724 CRTAC1Q9NQ79 661 aa13.56□□□□□ -0.24
TRIM40-206ENST00000376724 hCG_1818297A0A087WSY0 165 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms