RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ECSITQ9BQ95 431 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 PLA2G4CQ9UP65 541 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 LY75O60449 1722 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 CCDC195A0A1B0GUA6 201 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 CAPN14A8MX76 684 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 MT-ND3P03897 115 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 GJA8P48165 433 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 TOMM20Q15388 145 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 SMTNL2Q2TAL5 461 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 XKR9Q5GH70 373 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 MYO1HQ8N1T3 1032 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 ZDHHC15Q96MV8 337 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 MCEEQ96PE7 176 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 FNBP1Q96RU3 617 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 RIT2Q99578 217 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 SPATA16Q9BXB7 569 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 SLC7A8Q9UHI5 535 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 GNA15P30679 374 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 GRIA2P42262 883 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CDC16Q13042 620 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PDCD2Q16342 344 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SH2D5Q6ZV89 423 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 MAP4K3Q8IVH8 894 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PALM2Q8IXS6 379 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PLEKHG4BQ96PX9 1271 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SENP7Q9BQF6 1050 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 MMADHCQ9H3L0 296 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ST6GALNAC4Q9H4F1 302 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SPATA7Q9P0W8 599 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PDP2Q9P2J9 529 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PPARGC1AQ9UBK2 798 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PCDHB4Q9Y5E5 795 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 NFASCO94856 1347 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 RPL22P35268 128 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 DSG1Q02413 1049 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 KCNT1Q5JUK3 1230 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 DRICH1Q6PGQ1 229 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 RNF111Q6ZNA4 994 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 NDNQ99608 321 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 TUBB6Q9BUF5 446 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 TDRD3Q9H7E2 651 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PCDH9Q9HC56 1237 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 DRG1Q9Y295 367 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CYB561D2O14569 222 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 AVILO75366 819 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 VNN1O95497 513 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CDKN2BP42772 138 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 SCNN1BP51168 640 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 MPP3Q13368 585 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 BRDTQ58F21 947 aaPredicted RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 ISLR2Q6UXK2 745 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 C15orf39Q6ZRI6 1047 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 PRPF39Q86UA1 669 aaKnown RBP12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 C20orf27Q9GZN8 174 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 CNTN3Q9P232 1028 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 STRIP2Q9ULQ0 834 aa12.01□□□□□ -0.49
TM9SF2-201ENST00000376387 TMEM191CA6NGB0 347 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 A6NJR5 290 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 A8MXQ7 604 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 ITGAVP06756 1048 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 TMEM191BP0C7N4 346 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 OTUD4Q01804 1114 aaKnown RBP12□□□□□ -0.49
TM9SF2-201ENST00000376387 UBAP2LQ14157 1087 aaKnown RBP12□□□□□ -0.49
TM9SF2-201ENST00000376387 KBTBD12Q3ZCT8 623 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 ALKBH2Q6NS38 261 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 UNC45BQ8IWX7 931 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 GSTCDQ8NEC7 633 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 ACTL9Q8TC94 416 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
TM9SF2-201ENST00000376387 KMT5AQ9NQR1 393 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 BUD23O43709 281 aaKnown RBP12□□□□□ -0.49
TM9SF2-201ENST00000376387 CD48P09326 243 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 PHBP35232 272 aa12□□□□□ -0.49
TM9SF2-201ENST00000376387 ACOT2P49753 483 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms