RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 NAPGQ99747 312 aaPredicted RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 TTPALQ9BTX7 342 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 TRIM7Q9C029 511 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 ST7Q9NRC1 585 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PARVAQ9NVD7 372 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 SPG21Q9NZD8 308 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 ANAPC7Q9UJX3 599 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 INSL6Q9Y581 213 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 LCHNA4D1U4 455 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 GOLGA8SH3BPF8 625 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PIK3R2O00459 728 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 TBC1D4O60343 1298 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 AP1G2O75843 785 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 BEST1O76090 585 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 ATP1A1P05023 1023 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 PPM1AP35813 382 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 RPL34P49207 117 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 SLC39A12Q504Y0 691 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 C9orf50Q5SZB4 431 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PRSS55Q6UWB4 352 aaPredicted RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 FAM183BPQ6ZVS7 135 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 ANKS3Q6ZW76 656 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 TMEM110Q86TL2 294 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PIGZQ86VD9 579 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 MCRS1Q96EZ8 462 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PIWIL1Q96J94 861 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 CALR3Q96L12 384 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 RAD9AQ99638 391 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 SMOQ99835 787 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 MRPL47Q9HD33 250 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 CHST7Q9NS84 486 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 JRKLQ9Y4A0 524 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 GREB1Q4ZG55 1949 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 COL4A4P53420 1690 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 TMEM110-MUSTN1A8MSY1 372 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 H7C4K7 107 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 ENC1O14682 589 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 PAPSS1O43252 624 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 NCK2O43639 380 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 TLL1O43897 1013 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 SOD2P04179 222 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 BDNFP23560 247 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 MAP3K7CLP57077 242 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 SLC8A3P57103 927 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 RPL7AP62424 266 aaKnown RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 TAP1Q03518 808 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 ADIGQ0VDE8 80 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 ZNF268Q14587 947 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 PSMD5Q16401 504 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 PTPROQ16827 1216 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 FAM102AQ5T9C2 384 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 OLFML1Q6UWY5 402 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 C4orf50Q6ZRC1 276 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 DAAM2Q86T65 1068 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 SYCE1Q8N0S2 351 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 FEZF2Q8TBJ5 459 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 RIN2Q8WYP3 895 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 HSFY1Q96LI6 401 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 OXCT2Q9BYC2 517 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 MIS12Q9H081 205 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 CSNK1G1Q9HCP0 422 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 AAASQ9NRG9 546 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 METTL5Q9NRN9 209 aaKnown RBP11.02□□□□□ -0.65
PDPN-203ENST00000376061 MTRRQ9UBK8 725 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 HYOU1Q9Y4L1 999 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 NR2E3Q9Y5X4 410 aa11.02□□□□□ -0.65
PDPN-203ENST00000376061 TMEM191CA6NGB0 347 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 HHLA1C9JL84 531 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 ADAM12O43184 909 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 FGF18O76093 207 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 LCP1P13796 627 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 CPB1P15086 417 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 ACADSBP45954 432 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 GLUD2P49448 558 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 RABGGTBP53611 331 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 SNX16P57768 344 aa11.01□□□□□ -0.65
PDPN-203ENST00000376061 AMPD2Q01433 879 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms