RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SCARA3Q6AZY7 606 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 IQUBQ8NA54 791 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 TTC16Q8NEE8 873 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 ZNF507Q8TCN5 953 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 PCED1BQ96HM7 432 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 FAM84AQ96KN4 292 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 SNX25Q9H3E2 840 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 MAGEF1Q9HAY2 307 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 OBSL1O75147 1896 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 SPTLC2O15270 562 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 TNNI1P19237 187 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 GNL1P36915 607 aaPredicted RBP24.76■■□□□ 1.55
C9orf47-202ENST00000375850 ASIC1P78348 528 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 PSMD2Q13200 908 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 E2F4Q16254 413 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 EPM2AIP1Q7L775 607 aaPredicted RBP24.76■■□□□ 1.55
C9orf47-202ENST00000375850 HS2ST1Q7LGA3 356 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 ZNF396Q96N95 335 aaPredicted RBP24.76■■□□□ 1.55
C9orf47-202ENST00000375850 ELOVL4Q9GZR5 314 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 CGNQ9P2M7 1197 aaKnown RBP24.76■■□□□ 1.55
C9orf47-202ENST00000375850 ACACBO00763 2458 aa24.76■■□□□ 1.55
C9orf47-202ENST00000375850 TM4SF5O14894 197 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 STAU1O95793 577 aaKnown RBP24.75■■□□□ 1.55
C9orf47-202ENST00000375850 PDGFRBP09619 1106 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 PSMD6Q15008 389 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 FAM26FQ5R3K3 315 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 STPG1Q5TH74 334 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 DDX42Q86XP3 938 aaKnown RBP eCLIP24.75■■□□□ 1.55
C9orf47-202ENST00000375850 TSTD1Q8NFU3 115 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 EZH1Q92800 747 aaPredicted RBP24.75■■□□□ 1.55
C9orf47-202ENST00000375850 SLITRK1Q96PX8 696 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 CGRRF1Q99675 332 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 DUSP15Q9H1R2 295 aaPredicted RBP24.75■■□□□ 1.55
C9orf47-202ENST00000375850 AGPAT3Q9NRZ7 376 aa24.75■■□□□ 1.55
C9orf47-202ENST00000375850 EPG5Q9HCE0 2579 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 ZNF840PA6NDX5 716 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 LEFTY2O00292 366 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 OLFM2O95897 454 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 DLATP10515 647 aaKnown RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 ATICP31939 592 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 HOXD13P35453 343 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 EIF2DP41214 584 aaKnown RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 TNNC1P63316 161 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 USP39Q53GS9 565 aaKnown RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 TDRD10Q5VZ19 366 aaKnown RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 NAIF1Q69YI7 327 aaPredicted RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 XXYLT1Q8NBI6 393 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 USP33Q8TEY7 942 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 LINC00597Q9H2U6 94 aa24.74■■□□□ 1.55
C9orf47-202ENST00000375850 ZNF638Q14966 1978 aaKnown RBP24.74■■□□□ 1.55
C9orf47-202ENST00000375850 RALGAPA1Q6GYQ0 2036 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 GREB1Q4ZG55 1949 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 F8VP50 259 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 YEATS4O95619 227 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 PDIA4P13667 645 aaKnown RBP24.73■■□□□ 1.55
C9orf47-202ENST00000375850 MRPS21P82921 87 aaKnown RBP24.73■■□□□ 1.55
C9orf47-202ENST00000375850 HSF5Q4G112 596 aaPredicted RBP24.73■■□□□ 1.55
C9orf47-202ENST00000375850 MDH1BQ5I0G3 518 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 GLIS3Q8NEA6 775 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 PDZD8Q8NEN9 1154 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 OR6B3Q8NGW1 331 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 C7orf25Q9BPX7 421 aa24.73■■□□□ 1.55
C9orf47-202ENST00000375850 TGFB1I1O43294 461 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 CUTAO60888 179 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 OPRD1P41143 372 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 DGKEP52429 567 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 USP46P62068 366 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 CYP24A1Q07973 514 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 TRPC3Q13507 836 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 CCDC6Q16204 474 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 WDR72Q3MJ13 1102 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 UNC13DQ70J99 1090 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 RASSF3Q86WH2 238 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 C12orf56Q8IXR9 622 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 OVCA2Q8WZ82 227 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 HPS3Q969F9 1004 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 SYAP1Q96A49 352 aaPredicted RBP24.72■■□□□ 1.55
C9orf47-202ENST00000375850 CNOT6LQ96LI5 555 aaKnown RBP24.72■■□□□ 1.55
C9orf47-202ENST00000375850 MRPL45Q9BRJ2 306 aaKnown RBP24.72■■□□□ 1.55
C9orf47-202ENST00000375850 TBC1D14Q9P2M4 693 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 ANGPTL2Q9UKU9 493 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 CACNA1BQ00975 2339 aa24.72■■□□□ 1.55
C9orf47-202ENST00000375850 ATP8B3O60423 1300 aa24.71■■□□□ 1.55
C9orf47-202ENST00000375850 BCLAF3A2AJT9 711 aaKnown RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 RTN3O95197 1032 aaPredicted RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 OAS1P00973 400 aaKnown RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 CST3P01034 146 aaPredicted RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 PTPN1P18031 435 aaKnown RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 RNF43Q68DV7 783 aa24.71■■□□□ 1.55
C9orf47-202ENST00000375850 ADGRG2Q8IZP9 1017 aa24.71■■□□□ 1.55
C9orf47-202ENST00000375850 DHX58Q96C10 678 aa24.71■■□□□ 1.55
C9orf47-202ENST00000375850 LSM14BQ9BX40 385 aaKnown RBP24.71■■□□□ 1.55
C9orf47-202ENST00000375850 MMP17Q9ULZ9 603 aa24.71■■□□□ 1.55
C9orf47-202ENST00000375850 K7ELQ4 463 aaPredicted RBP24.7■■□□□ 1.54
C9orf47-202ENST00000375850 K7EQS6 105 aa24.7■■□□□ 1.54
C9orf47-202ENST00000375850 ALDH1A2O94788 518 aa24.7■■□□□ 1.54
C9orf47-202ENST00000375850 CAVIN2O95810 425 aa24.7■■□□□ 1.54
C9orf47-202ENST00000375850 ADH1CP00326 375 aa24.7■■□□□ 1.54
C9orf47-202ENST00000375850 AP3M2P53677 418 aa24.7■■□□□ 1.54
C9orf47-202ENST00000375850 FILIP1Q7Z7B0 1213 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms