RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 HARSP12081 509 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 BRD2P25440 801 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 SFNP31947 248 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 PHBP35232 272 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 ARL4CP56559 192 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 MCL1Q07820 350 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 CATSPERGQ6ZRH7 1159 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 PPIL6Q8IXY8 311 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 ANKRD13AQ8IZ07 590 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 NAT8LQ8N9F0 302 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 C12orf42Q96LP6 360 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 VPS11Q9H270 941 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 SSU72Q9NP77 194 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 RBAKQ9NYW8 714 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 CHMP2BQ9UQN3 213 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 LPXNO60711 386 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 PSMG1O95456 288 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 MT-ND3P03897 115 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 ARHGAP28Q9P2N2 729 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 RPL26L1Q9UNX3 145 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 AGTPBP1Q9UPW5 1226 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 FAM237BA0A1B0GVD1 139 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 TM9SF1O15321 606 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 CST8O60676 142 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 FESP07332 822 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 CD48P09326 243 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 DLDP09622 509 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 ESRRAP11474 423 aaPredicted RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 SARNPP82979 210 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 CDK16Q00536 496 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 LBRQ14739 615 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 ARHGEF16Q5VV41 709 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 GADL1Q6ZQY3 521 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 ZC3H18Q86VM9 953 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 UNC45BQ8IWX7 931 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 FBXO27Q8NI29 283 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 TMEM143Q96AN5 459 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 SKA1Q96BD8 255 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 SH3GL3Q99963 347 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 PPP1R12CQ9BZL4 782 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 PDLIM7Q9NR12 457 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 PXMP2Q9NR77 195 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 PAPOLBQ9NRJ5 636 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 WASF2Q9Y6W5 498 aa14.77□□□□□ -0.04
CLCNKA-202ENST00000375692 TCRBV5S1A1TA0A578 114 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 C3orf70A6NLC5 250 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 E5RJQ4 531 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 HNRNPCL1O60812 293 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 NPTXRO95502 500 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 MYL2P10916 166 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 PYGBP11216 843 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 GJA5P36382 358 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC34A1Q06495 639 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 THOC5Q13769 683 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 MTERF2Q49AM1 385 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 LRRC38Q5VT99 294 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 SLC30A9Q6PML9 568 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 LRRC74BQ6ZQY2 392 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 ALYREFQ86V81 257 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 WDTC1Q8N5D0 677 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 OPTNQ96CV9 577 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 PPCSQ9HAB8 311 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 C17orf75Q9HAS0 396 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 XPO7Q9UIA9 1087 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 C2CD2Q9Y426 696 aa14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 CTDP1Q9Y5B0 961 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-202ENST00000375692 PCNTO95613 3336 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ITGBL1O95965 494 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 AMPD1P23109 780 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 IL1R2P27930 398 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 NCOA4Q13772 614 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 SGSM1Q2NKQ1 1148 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 KLHL38Q2WGJ6 581 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 MDH1BQ5I0G3 518 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 OR52E8Q6IFG1 317 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ERO1BQ86YB8 467 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 FAM71DQ8N9W8 422 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 REPS2Q8NFH8 660 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 RSAD2Q8WXG1 361 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 TARS2Q9BW92 718 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ZNF214Q9UL59 606 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ASB3Q9Y575 518 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 FCHO1O14526 889 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 AHCYL1O43865 530 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 FAM155BO75949 473 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 RFC1P35251 1148 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 PAPOLAP51003 745 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 PRKD1Q15139 912 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 SH3D19Q5HYK7 790 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 SNRNP48Q6IEG0 339 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 IRGCQ6NXR0 463 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 CCDC60Q8IWA6 550 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms