RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 PDK4Q16654 411 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 ZC3H12AQ5D1E8 599 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 KDELC2Q7Z4H8 507 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 BBOF1Q8ND07 529 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 PIP4K2CQ8TBX8 421 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 CPT1BQ92523 772 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 PIWIL1Q96J94 861 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 TRPA1O75762 1119 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 OAS1P00973 400 aaKnown RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 CXCL8P10145 99 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF252P-AS1Q0IIN9 211 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.444e-7■■■□□ 14.7
MCF2L-202ENST00000375597 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 APOL2Q9BQE5 337 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 SCOCQ9UIL1 159 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 SCINQ9Y6U3 715 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 NRAPQ86VF7 1730 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 MAP3K7O43318 606 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 CIB2O75838 187 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 SMNDC1O75940 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 ZBED1O96006 694 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 PSAPP07602 524 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 SLC1A1P43005 524 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 CLCN3P51790 818 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 RABGGTBP53611 331 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 GLRA4Q5JXX5 417 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 TRMT10BQ6PF06 316 aaKnown RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 EXD1Q8NHP7 514 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 ADAM32Q8TC27 787 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 VPS11Q9H270 941 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
MCF2L-202ENST00000375597 ZC3H7BQ9UGR2 993 aaKnown RBP12.32□□□□□ -0.44
MCF2L-202ENST00000375597 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 EXTL3O43909 919 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF200P98182 395 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 KRT76Q01546 638 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 SP2Q02086 613 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 TRAF1Q13077 416 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 RNF43Q68DV7 783 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 DENND5BQ6ZUT9 1274 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 RCOR2Q8IZ40 523 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PHC3Q8NDX5 983 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 GSTCDQ8NEC7 633 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 MYOCOSA0A1B0GUC4 107 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PGK2P07205 417 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 NELFEP18615 380 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 KLRC2P26717 231 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PTPN4P29074 926 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CAV1Q03135 178 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CENPCQ03188 943 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ZACNQ401N2 412 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 LPCAT4Q643R3 524 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PTAR1Q7Z6K3 402 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CCNYQ8ND76 341 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 NSL1Q96IY1 281 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 SRPK1Q96SB4 655 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CPXM1Q96SM3 734 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF302Q9NR11 478 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 STOML1Q9UBI4 398 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PRKAG3Q9UGI9 489 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 LAMA2P24043 3122 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 hCG_1818297A0A087WSY0 165 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CCND2P30279 289 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 MIPP30301 263 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PDE1BQ01064 536 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 BST1Q10588 318 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 LY6KQ17RY6 165 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 ASRGL1Q7L266 308 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 KIAA0319LQ8IZA0 1049 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 TEX9Q8N6V9 391 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 NDRG1Q92597 394 aaKnown RBP12.31□□□□□ -0.44
MCF2L-202ENST00000375597 FAM149B1Q96BN6 582 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 MARK4Q96L34 752 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
MCF2L-202ENST00000375597 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms