RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 POLE2P56282 527 aa22.11■■□□□ 1.13
UPF3A-202ENST00000375299 FAAP100Q0VG06 881 aa22.11■■□□□ 1.13
UPF3A-202ENST00000375299 POLNQ7Z5Q5 900 aa22.11■■□□□ 1.13
UPF3A-202ENST00000375299 SLC44A1Q8WWI5 657 aa22.11■■□□□ 1.13
UPF3A-202ENST00000375299 NR1H4Q96RI1 486 aaPredicted RBP22.11■■□□□ 1.13
UPF3A-202ENST00000375299 PDLIM7Q9NR12 457 aa22.11■■□□□ 1.13
UPF3A-202ENST00000375299 RBAKQ9NYW8 714 aaPredicted RBP22.11■■□□□ 1.13
UPF3A-202ENST00000375299 B2RBV5 119 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 E5RJQ4 531 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 H0YCG3 227 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 CST8O60676 142 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 DGAT1O75907 488 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 PYGBP11216 843 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 RSBN1LQ6PCB5 846 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 NET1Q7Z628 596 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 CPXCR1Q8N123 301 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 FAM192AQ9GZU8 254 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 HOMER2Q9NSB8 354 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 TESPA1A2RU30 521 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 H3BRJ5 948 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 RTN3O95197 1032 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 STBD1O95210 358 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 LSM8O95777 96 aaKnown RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 INHBAP08476 426 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 RFX8Q6ZV50 586 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 BBS12Q6ZW61 710 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 EGFL6Q8IUX8 553 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 POLR3FQ9H1D9 316 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 KCNK4Q9NYG8 393 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 STYXL1Q9Y6J8 313 aa22.1■■□□□ 1.13
UPF3A-202ENST00000375299 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.1■■□□□ 1.13
UPF3A-202ENST00000375299 CAPN14A8MX76 684 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 ZNF200P98182 395 aaPredicted RBP22.09■■□□□ 1.13
UPF3A-202ENST00000375299 UBR7Q8N806 425 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 CGRRF1Q99675 332 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 TCRBV9S1A1TA0A576 114 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 ABCD1P33897 745 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 ELK3P41970 407 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 RPS6P62753 249 aaKnown RBP22.09■■□□□ 1.13
UPF3A-202ENST00000375299 KBTBD12Q3ZCT8 623 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 SPDYE2Q495Y8 402 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 TREML1Q86YW5 311 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 IGDCC3Q8IVU1 814 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 UNC45BQ8IWX7 931 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 TMEM35BQ8NCS4 154 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 GBP5Q96PP8 586 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 PDCD2LQ9BRP1 358 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 TMEM39BQ9GZU3 492 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 HAPLN2Q9GZV7 340 aa22.09■■□□□ 1.13
UPF3A-202ENST00000375299 MAP3K20Q9NYL2 800 aaKnown RBP22.09■■□□□ 1.13
UPF3A-202ENST00000375299 PSME4Q14997 1843 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 ENO1P06733 434 aaKnown RBP22.08■■□□□ 1.13
UPF3A-202ENST00000375299 ANPEPP15144 967 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 BASP1P80723 227 aaKnown RBP22.08■■□□□ 1.13
UPF3A-202ENST00000375299 NBPF20Q3BBV1 942 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 CCNJLQ8IV13 435 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 SCUBE1Q8IWY4 988 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 ATP6V0A1Q93050 837 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 ZWILCHQ9H900 591 aa22.08■■□□□ 1.13
UPF3A-202ENST00000375299 KBTBD13C9JR72 458 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 TBC1D12O60347 775 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 CIB2O75838 187 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 RAD17O75943 681 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 UBTFL6P0CB48 400 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 SLC25A11Q02978 314 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 SMTNL2Q2TAL5 461 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 TRMT5Q32P41 509 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 C6orf163Q5TEZ5 329 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 RBM15BQ8NDT2 890 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 OR5B17Q8NGF7 314 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 GMLQ99445 158 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 IQCGQ9H095 443 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 RAVER2Q9HCJ3 691 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 SEPT9Q9UHD8 586 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 PLA2G4CQ9UP65 541 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 COPEO14579 308 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 LYNP07948 512 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 BRD2P25440 801 aaKnown RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 RPS6KA3P51812 740 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 NCOA4Q13772 614 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 RIPOR1Q6ZS17 1223 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 MYLK4Q86YV6 388 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-202ENST00000375299 FBXO27Q8NI29 283 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 C7orf26Q96N11 449 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 PXMP2Q9NR77 195 aa22.07■■□□□ 1.12
UPF3A-202ENST00000375299 I3L4J1 428 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 DKC1O60832 514 aaKnown RBP eCLIP22.06■■□□□ 1.12
UPF3A-202ENST00000375299 TM7SF2O76062 418 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 PSMA2P25787 234 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 DSG1Q02413 1049 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 ZBTB41Q5SVQ8 909 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 CYP4A22Q5TCH4 519 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 IZUMO2Q6UXV1 221 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 SESTD1Q86VW0 696 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 PANX3Q96QZ0 392 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 SRPK1Q96SB4 655 aaKnown RBP22.06■■□□□ 1.12
UPF3A-202ENST00000375299 RMDN3Q96TC7 470 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 ZNF518BQ9C0D4 1074 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 ASCC2Q9H1I8 757 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms