RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 TRPA1O75762 1119 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 JUPP14923 745 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 PITPNBP48739 271 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 XKR9Q5GH70 373 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 FAM209BQ5JX69 171 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 STOX1Q6ZVD7 989 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 TTC7BQ86TV6 843 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 C17orf53Q8N3J3 647 aaPredicted RBP9.46□□□□□ -0.89
UBR4-201ENST00000375218 FAM71DQ8N9W8 422 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 CHFRQ96EP1 664 aa9.46□□□□□ -0.89
UBR4-201ENST00000375218 LENG8Q96PV6 779 aaPredicted RBP9.46□□□□□ -0.89
UBR4-201ENST00000375218 ZNF215Q9UL58 517 aaPredicted RBP9.46□□□□□ -0.89
UBR4-201ENST00000375218 hCG_1809904A0A1W2PP81 198 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 A0A1W2PPE2 198 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 A0A1W2PR64 198 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 ACOD1A6NK06 481 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 TSPAN3O60637 253 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 DNAJB6O75190 326 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 SLC22A3O75751 556 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 ATP5JP18859 108 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 HLA-DPA1P20036 260 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 FGFR2P21802 821 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 CPA2P48052 419 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 HGH1Q9BTY7 390 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 NINJ2Q9NZG7 142 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 EHD3Q9NZN3 535 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 MAP3K15Q6ZN16 1313 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 RPAP1Q9BWH6 1393 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 EEF1GP26641 437 aaKnown RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 HOXA11P31270 313 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 RFC1P35251 1148 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 TRIM23P36406 574 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 RNF144AP50876 292 aaPredicted RBP9.46□□□□□ -0.9
UBR4-201ENST00000375218 ADAM15Q13444 863 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 ACAP2Q15057 778 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 PIK3C3Q8NEB9 887 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 TSPEARQ8WU66 669 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 TMEM40Q8WWA1 233 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 LPIN3Q9BQK8 851 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 PLA2G12BQ9BX93 195 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 FAM129AQ9BZQ8 928 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 NDST4Q9H3R1 872 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 XKR8Q9H6D3 395 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 RNF112Q9ULX5 631 aa9.46□□□□□ -0.9
UBR4-201ENST00000375218 CYP3A4P08684 503 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 HSMCR30P0CW71 290 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 EDN3P14138 238 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CD46P15529 392 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ATP1A2P50993 1020 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ITGA8P53708 1063 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 OXCT1P55809 520 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ARHGAP8P85298 464 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 TRIM32Q13049 653 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ZNF805Q5CZA5 627 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 TJAP1Q5JTD0 557 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 BEND4Q6ZU67 534 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CCDC13Q8IYE1 715 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CCDC74BQ96LY2 380 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 PIP5K1AQ99755 562 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 SPZ1Q9BXG8 430 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 OXCT2Q9BYC2 517 aaPredicted RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 AFF2P51816 1311 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 RAD51BO15315 384 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 RNF40O75150 1001 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 APOEP02649 317 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 PTBP1P26599 531 aaKnown RBP eCLIP9.45□□□□□ -0.9
UBR4-201ENST00000375218 POLR2GP62487 172 aaKnown RBP eCLIP9.45□□□□□ -0.9
UBR4-201ENST00000375218 GRB10Q13322 594 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 DENND5BQ6ZUT9 1274 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 LRRTM4Q86VH4 590 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 MAP7D3Q8IWC1 876 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 OSCP1Q8WVF1 389 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 C1orf21Q9H246 121 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 PCOLCE2Q9UKZ9 415 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CCNT1O60563 726 aaKnown RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 DAB1O75553 588 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 TRIM16O95361 564 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 EGFRP00533 1210 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 IVLP07476 585 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 RFX8Q6ZV50 586 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 DSG4Q86SJ6 1040 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 STX12Q86Y82 276 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ST13P4Q8IZP2 240 aaPredicted RBP9.45□□□□□ -0.9
UBR4-201ENST00000375218 PRRX2Q99811 253 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms