RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ELMSAN1Q6PJG2 1045 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 CNDP1Q96KN2 507 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PNKPQ96T60 521 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 SPATC1LQ9H0A9 340 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 GIMAP4Q9NUV9 329 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 CAB39Q9Y376 341 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 ARFGEF2Q9Y6D5 1785 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 FKBP9O95302 570 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 POLBP06746 335 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 FKBP9P1Q75LS8 142 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PABPC3Q9H361 631 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TBC1D12O60347 775 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 ALBP02768 609 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 FBXW4P57775 412 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 GIT2Q14161 759 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 ADRM1Q16186 407 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 C4orf19Q8IY42 314 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 SNRNP27Q8WVK2 155 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 MPP6Q9NZW5 540 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-202ENST00000374747 PDE5AO76074 875 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SLC9A1P19634 815 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 RGS2P41220 211 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 FNTAP49354 379 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 TMEM132DQ14C87 1099 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 ANO4Q32M45 955 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CARD9Q9H257 536 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 ZNF142P52746 1687 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CSPG5O95196 566 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CYP2C9P11712 490 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 KCNK10P57789 538 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 USP50Q70EL3 339 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SUGP1Q8IWZ8 645 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 PPIL6Q8IXY8 311 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 FRMD8Q9BZ67 464 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CCDC78A2IDD5 438 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 FGRP09769 529 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SCTRP47872 440 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 KCNJ1P48048 391 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 KDELC2Q7Z4H8 507 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SPATA18Q8TC71 538 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 STMN3Q9NZ72 180 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 PHTF1Q9UMS5 762 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 DGKIO75912 1065 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 GSNP06396 782 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 RARBP10826 455 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SLC26A2P50443 739 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HERVK_113P62684 666 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 ZNF484Q5JVG2 852 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 C4orf22Q6V702 233 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 LRRC71Q8N4P6 559 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 TNIP2Q8NFZ5 429 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 H2AFXP16104 143 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 FCGRTP55899 365 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 NUP107P57740 925 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 PGM5Q15124 567 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 KIZQ2M2Z5 673 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 CALML6Q8TD86 181 aa12.75□□□□□ -0.37
NPLOC4-202ENST00000374747 SPDYE5A6NIY4 337 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 LZTS3O60299 673 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 PPATQ06203 517 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 SPDYE7PQ495Y7 208 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 ANKS3Q6ZW76 656 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 GLI3P10071 1580 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 TGFB3P10600 412 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 KLK7P49862 253 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 EFL1Q7Z2Z2 1120 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 GPR141Q7Z602 305 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 ATPAF2Q8N5M1 289 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
NPLOC4-202ENST00000374747 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms