RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ARHGAP17Q68EM7 881 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 NUP93Q8N1F7 819 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
HDHD3-202ENST00000374180 GPR88Q9GZN0 384 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 IL21Q9HBE4 155 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 CSNK1G1Q9HCP0 422 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 SIX2Q9NPC8 291 aa16.93■□□□□ 0.3
HDHD3-202ENST00000374180 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 MYO10Q9HD67 2058 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 DLL1O00548 723 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 BEST1O76090 585 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 F11P03951 625 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 ASGR2P07307 311 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 VDRP11473 427 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 USP46P62068 366 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 TPM4P67936 248 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 CLEC20AQ6ZU45 233 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 LUZP1Q86V48 1076 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 ZMIZ2Q8NF64 920 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 NXPE3Q969Y0 559 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 LSM14BQ9BX40 385 aaKnown RBP16.92■□□□□ 0.3
HDHD3-202ENST00000374180 DUSP16Q9BY84 665 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 KCNK12Q9HB15 430 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 IGSF9Q9P2J2 1179 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 DNAJC12Q9UKB3 198 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 CNTN6Q9UQ52 1028 aa16.92■□□□□ 0.3
HDHD3-202ENST00000374180 PTPRDP23468 1912 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
HDHD3-202ENST00000374180 NPR3P17342 541 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 USP8P40818 1118 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 SLC8A3P57103 927 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 CYP4F8P98187 520 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 UBXN1Q04323 297 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 GPR158Q5T848 1215 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 POTEHQ6S545 545 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 MTSS1LQ765P7 747 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 TMEM150AQ86TG1 271 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 ST13P5Q8NFI4 369 aaPredicted RBP16.91■□□□□ 0.3
HDHD3-202ENST00000374180 ZSWIM3Q96MP5 696 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 MUTYHQ9UIF7 546 aa16.91■□□□□ 0.3
HDHD3-202ENST00000374180 ANHXE9PGG2 379 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 TNFRSF10BO14763 440 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 YWHAQP27348 245 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 ZNF132P52740 706 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 SLC5A3P53794 718 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 IFRD2Q12894 506 aaPredicted RBP16.9■□□□□ 0.3
HDHD3-202ENST00000374180 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 PARM1Q6UWI2 310 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 APTXQ7Z2E3 356 aaKnown RBP16.9■□□□□ 0.3
HDHD3-202ENST00000374180 RSAD2Q8WXG1 361 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 MRPS31Q92665 395 aaKnown RBP16.9■□□□□ 0.3
HDHD3-202ENST00000374180 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 PLCB1Q9NQ66 1216 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 HESX1Q9UBX0 185 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 TSPAN16Q9UKR8 245 aa16.9■□□□□ 0.3
HDHD3-202ENST00000374180 TAF10Q12962 218 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 HTR4Q13639 388 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 CNGA2Q16280 664 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 PTPN21Q16825 1174 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 GOLGA7BQ2TAP0 167 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 FAM78AQ5JUQ0 283 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 LRSAM1Q6UWE0 723 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 SCAMP5Q8TAC9 235 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 ZSCAN18Q8TBC5 510 aaPredicted RBP16.89■□□□□ 0.29
HDHD3-202ENST00000374180 SHC3Q92529 594 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 FGF14Q92915 247 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 SMARCD2Q92925 531 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
HDHD3-202ENST00000374180 ASB16Q96NS5 453 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 TSPY26PQ9H489 355 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 TASP1Q9H6P5 420 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 COMMD8Q9NX08 183 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 ZMYM5Q9UJ78 669 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 SORCS3Q9UPU3 1222 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 NUMBLQ9Y6R0 609 aa16.89■□□□□ 0.29
HDHD3-202ENST00000374180 O00370 1275 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 FOXN3O00409 490 aaPredicted RBP16.88■□□□□ 0.29
HDHD3-202ENST00000374180 DCXO43602 365 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 CALCAP01258 141 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 ALADP13716 330 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 UCHL3P15374 230 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 RFX1P22670 979 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 BRD2P25440 801 aaKnown RBP16.88■□□□□ 0.29
HDHD3-202ENST00000374180 DDX6P26196 483 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDHD3-202ENST00000374180 PPP3CCP48454 512 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 KLK7P49862 253 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 BCAT1P54687 386 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 TDGQ13569 410 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 SYCP1Q15431 976 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 STILQ15468 1287 aa16.88■□□□□ 0.29
HDHD3-202ENST00000374180 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms