RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LILRB3O75022 631 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ITGA4P13612 1032 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ALADP13716 330 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ATP2A2P16615 1042 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 EN1Q05925 392 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 BFSP1Q12934 665 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 DCAF17Q5H9S7 520 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 RAPH1Q70E73 1250 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 TAS1R3Q7RTX0 852 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 FAM83AQ86UY5 434 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ANKRD53Q8N9V6 530 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 LMO3Q8TAP4 145 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 STK32AQ8WU08 396 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 XPO6Q96QU8 1125 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 CAMKK2Q96RR4 588 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 TUBA1CQ9BQE3 449 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 DBNDD1Q9H9R9 158 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 CFAP73A6NFT4 308 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 RSPH10B2B2RC85 870 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 HNRNPCL2B2RXH8 293 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 HNRNPCL1O60812 293 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 GAS7O60861 476 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 LMNAP02545 664 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 NUDT17P0C025 328 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 RSPH10BP0C881 870 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 DRD4P21917 467 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ALAS2P22557 587 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 CASP4P49662 377 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 PTENP60484 403 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 AP1B1Q10567 949 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 MOGQ16653 247 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ERMARDQ5T6L9 678 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 SLC44A2Q8IWA5 706 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 ANKS4BQ8N8V4 417 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 LNX1Q8TBB1 728 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
GARNL3-201ENST00000373386 NXPE3Q969Y0 559 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 DYDC2Q96IM9 177 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 COG8Q96MW5 612 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 CSRNP1Q96S65 589 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 MXRA8Q9BRK3 442 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 TXLNGYQ9BZA5 131 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 DPH5Q9H2P9 285 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 TMOD2Q9NZR1 351 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 HSFX1Q9UBD0 423 aa8.59□□□□□ -1.03
GARNL3-201ENST00000373386 SPDYE2BA6NHP3 402 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 TMEM114B3SHH9 223 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DNM1LO00429 736 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DDX3YO15523 660 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ZC3H11AO75152 810 aaKnown RBP eCLIP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PDE5AO76074 875 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 FKBP9O95302 570 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ASMTLO95671 621 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CRYZL1O95825 349 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MMP10P09238 476 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 RPL9P32969 192 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GALCP54803 685 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 OLR1P78380 273 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 TCP10Q12799 353 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MAPK7Q13164 816 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PLS1Q14651 629 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 C16orf54Q6UWD8 224 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DBX2Q6ZNG2 339 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DEFB132Q7Z7B7 95 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CCDC116Q8IYX3 515 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CCDC197Q8NCU1 140 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 RDM1Q8NG50 284 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CCT6BQ92526 530 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GPATCH1Q9BRR8 931 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 INTS2Q9H0H0 1204 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DNAJC12Q9UKB3 198 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 AGO2Q9UKV8 859 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 OR5K4A6NMS3 321 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 FGGP02679 453 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CPA3P15088 417 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ATP6V1C1P21283 382 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CASP2P42575 452 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PTGER2P43116 358 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MYL7Q01449 175 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DRAP1Q14919 205 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CNPY1Q3B7I2 92 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SCYL3Q8IZE3 742 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ATP8B4Q8TF62 1192 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PGM2Q96G03 612 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SERINC2Q96SA4 455 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ZNF577Q9BSK1 485 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CELF4Q9BZC1 486 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms