RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MCUQ8NE86 351 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 DPF2Q92785 391 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 REEP2Q9BRK0 252 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MXRA8Q9BRK3 442 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 KIAA1683Q9H0B3 1180 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 RRN3Q9NYV6 651 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 MIF4GDA9UHW6 222 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 AREL1O15033 823 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 TEX33O43247 280 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CHRNA3P32297 505 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 NEK5Q6P3R8 708 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MCPH1Q8NEM0 835 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ZIM3Q96PE6 472 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SPATA7Q9P0W8 599 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 A0A1W2PQ72 361 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PDZK1P1A8MUH7 402 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 B2RBV5 119 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SMU1Q2TAY7 513 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 KRT39Q6A163 491 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CCNI2Q6ZMN8 369 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 UTS2BQ765I0 119 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SCUBE1Q8IWY4 988 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MDM1Q8TC05 714 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 GTF3C2Q8WUA4 911 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 CNDP1Q96KN2 507 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PPCSQ9HAB8 311 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CEP72Q9P209 647 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CTNNAL1Q9UBT7 734 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SPATA2Q9UM82 520 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 AKT3Q9Y243 479 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SNX2O60749 519 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ZBED1O96006 694 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SOX6P35712 828 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PRPF39Q86UA1 669 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 MAGEC3Q8TD91 643 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ALG13Q9NP73 1137 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 MARCOQ9UEW3 520 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 VEGFAP15692 232 aaPredicted RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 RAB27AP51159 221 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 KPNA2P52292 529 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 USP46P62068 366 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SPATA4Q8NEY3 305 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RANBP17Q9H2T7 1088 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 KCNH7Q9NS40 1196 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 ARFGEF1Q9Y6D6 1849 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 LINC00854A0A1B0GVQ3 168 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 ANXA13P27216 316 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 EPHA7Q15375 998 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 TMEM119Q4V9L6 283 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 HMG20AQ9NP66 347 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 A0A087X0B3 334 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 ARHGEF37A1IGU5 675 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 PODXLO00592 558 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 KRT19P08727 400 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 ADAM17P78536 824 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 KLHL38Q2WGJ6 581 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 NCCRP1Q6ZVX7 275 aaPredicted RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 MTMR14Q8NCE2 650 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RMDN1Q96DB5 314 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RNPEPL1Q9HAU8 725 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 M0QZ92 97 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 CPA2P48052 419 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SLC12A1Q13621 1099 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SNF8Q96H20 258 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 TMEM245Q9H330 911 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RBM12Q9NTZ6 932 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 CLIC5Q9NZA1 410 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 MID2Q9UJV3 735 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 YWHABP31946 246 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 GIN1Q9NXP7 522 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 PCDHA10Q9Y5I2 948 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 LRRC37AA6NMS7 1700 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 CD44P16070 742 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 ARHGDIAP52565 204 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 COPAP53621 1224 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 BFSP2Q13515 415 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 MESDQ14696 234 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 EFTUD2Q15029 972 aaKnown RBP eCLIP6.84□□□□□ -1.311e-7■■■■■ 27.6
CHD6-203ENST00000373233 KIF19Q2TAC6 998 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 ATG14Q6ZNE5 492 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RIT2Q99578 217 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 AP5M1Q9H0R1 490 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 LPXNO60711 386 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 EPN2O95208 641 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 CHKAP35790 457 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 RPL5P46777 297 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 SLC9A3P48764 834 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 TRAPPC11Q7Z392 1133 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 PCGF5Q86SE9 256 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 SYTL5Q8TDW5 730 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms