RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 GJA1P17302 382 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 ATF6P18850 670 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 BDNFP23560 247 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 ELF1P32519 619 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 LHX1P48742 406 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 GABPB1Q06547 395 aaPredicted RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 MTMR3Q13615 1198 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 CBX2Q14781 532 aaPredicted RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 TDRD12Q587J7 1177 aaKnown RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 PPM1LQ5SGD2 360 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 LIN9Q5TKA1 542 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 DPY19L2P1Q6NXN4 242 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 CC2D1AQ6P1N0 951 aaPredicted RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 PDXDC1Q6P996 788 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 HS6ST3Q8IZP7 471 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 TMEM86AQ8N2M4 240 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 PPM1KQ8N3J5 372 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 WHAMMQ8TF30 809 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 SMG7Q92540 1137 aaKnown RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 SYT15Q9BQS2 421 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 IMPG2Q9BZV3 1241 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 NIF3L1Q9GZT8 377 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 LUC7LQ9NQ29 371 aaKnown RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 GCNT4Q9P109 453 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 DNMT3BQ9UBC3 853 aaKnown RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 AJAP1Q9UKB5 411 aaPredicted RBP10.15□□□□□ -0.78
TMEM254-201ENST00000372273 COQ4Q9Y3A0 265 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 INSL5Q9Y5Q6 135 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 SAR1BQ9Y6B6 198 aa10.15□□□□□ -0.78
TMEM254-201ENST00000372273 TCF20Q9UGU0 1960 aaKnown RBP10.15□□□□□ -0.79
TMEM254-201ENST00000372273 PLXNA3P51805 1871 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 TACC1O75410 805 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ZRANB2O95218 330 aaKnown RBP eCLIP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CCDC130P13994 396 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PTPN1P18031 435 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 WARSP23381 471 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CCR2P41597 374 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 AMPD2Q01433 879 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CREMQ03060 361 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SLC5A9Q2M3M2 681 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 GPR65Q8IYL9 337 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 B3GALNT2Q8NCR0 500 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 TRIM58Q8NG06 486 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ATXN2LQ8WWM7 1075 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ALS2CR12Q96Q35 445 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 KCNK16Q96T55 309 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 BCO2Q9BYV7 579 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ZNF518BQ9C0D4 1074 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ELOVL4Q9GZR5 314 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 EPC1Q9H2F5 836 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PLEKHA4Q9H4M7 779 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PIDD1Q9HB75 910 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CISHQ9NSE2 258 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 FAM53CQ9NYF3 392 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ARHGAP20Q9P2F6 1191 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 AFF4Q9UHB7 1163 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SSU72P8A0A1W2PR75 194 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 MACROD2A1Z1Q3 448 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 BEST1O76090 585 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 NOL4O94818 638 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 STAU1O95793 577 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 EIF4A3P38919 411 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 TSPY1Q01534 308 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SFMBT2Q5VUG0 894 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PAPD7Q5XG87 772 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 IQCEQ6IPM2 695 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CES5AQ6NT32 575 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 FAM171BQ6P995 826 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 TCEAL8Q8IYN2 117 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SUSD6Q92537 303 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 BAP1Q92560 729 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 SYN2Q92777 582 aaPredicted RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 MYLPFQ96A32 169 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 TCEAL4Q96EI5 215 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 CORO1BQ9BR76 489 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PRKD2Q9BZL6 878 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
TMEM254-201ENST00000372273 YIPF1Q9Y548 306 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 PCDHA13Q9Y5I0 950 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
TMEM254-201ENST00000372273 ENC1O14682 589 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 SEC31AO94979 1220 aaKnown RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 LCA5LO95447 670 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 PLEKP08567 350 aaPredicted RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 SRGAP2BP0DMP2 458 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 HOXB8P17481 243 aaPredicted RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 PON1P27169 355 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 PCSK1P29120 753 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 CUL2Q13617 745 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 SMAD2Q15796 467 aaKnown RBP10.13□□□□□ -0.79
TMEM254-201ENST00000372273 ATAT1Q5SQI0 421 aa10.13□□□□□ -0.79
TMEM254-201ENST00000372273 TPGS2Q68CL5 300 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms