RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TROVE2P10155 538 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM53-202ENST00000372237 RBP3P10745 1247 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 CDH8P55286 799 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 ORC1Q13415 861 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 NAA25Q14CX7 972 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 TAF1BQ53T94 588 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-202ENST00000372237 CDR2LQ86X02 465 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-202ENST00000372237 CEP120Q8N960 986 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 MZB1Q8WU39 189 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 DCAKDQ8WVC6 231 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 ZNF668Q96K58 619 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-202ENST00000372237 CHMP2BQ9UQN3 213 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 PPP2R3BQ9Y5P8 575 aa20.03■□□□□ 0.8
TMEM53-202ENST00000372237 ERBB2P04626 1255 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 MIPP30301 263 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 SLC8A3P57103 927 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 RNASELQ05823 741 aaKnown RBP20.02■□□□□ 0.8
TMEM53-202ENST00000372237 TAF5Q15542 800 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 LY6KQ17RY6 165 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 SLC45A4Q5BKX6 768 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 METTL7BQ6UX53 244 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 BANPQ8N9N5 519 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 SLC7A6OSQ96CW6 309 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-202ENST00000372237 C2orf40Q9H1Z8 148 aa20.02■□□□□ 0.8
TMEM53-202ENST00000372237 RAD23BP54727 409 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 DPYSL3Q14195 570 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 ATF7IP2Q5U623 682 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 SPATA18Q8TC71 538 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 TBC1D10AQ9BXI6 508 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 C12orf65Q9H3J6 166 aaKnown RBP20.02■□□□□ 0.79
TMEM53-202ENST00000372237 SLC17A7Q9P2U7 560 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 USP18Q9UMW8 372 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 PPME1Q9Y570 386 aa20.02■□□□□ 0.79
TMEM53-202ENST00000372237 INO80B-WBP1J3KQ70 363 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
TMEM53-202ENST00000372237 PROZP22891 400 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 CRYMQ14894 314 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 SPDYAQ5MJ70 313 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 TSHZ1Q6ZSZ6 1077 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 TRIM50Q86XT4 487 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 CMASQ8NFW8 434 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-202ENST00000372237 ZNF398Q8TD17 642 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 MIEF2Q96C03 454 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 CYTH2Q99418 400 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 INO80BQ9C086 356 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-202ENST00000372237 VPS11Q9H270 941 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 MANSC1Q9H8J5 431 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 SPON1Q9HCB6 807 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 DCTN4Q9UJW0 460 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 IKBKGQ9Y6K9 419 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 SSC5DA1L4H1 1573 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 MGAMO43451 1857 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 DDNO94850 711 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-202ENST00000372237 TGFB3P10600 412 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 NRLP54845 237 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 OVGP1Q12889 678 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 PLEKHG4Q58EX7 1191 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 MTDHQ86UE4 582 aaKnown RBP20.01■□□□□ 0.79
TMEM53-202ENST00000372237 KIRREL3Q8IZU9 778 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 MAB21L3Q8N8X9 362 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 NLRP4Q96MN2 994 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 BCO2Q9BYV7 579 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 RSAD1Q9HA92 442 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 PTPRHQ9HD43 1115 aa20.01■□□□□ 0.79
TMEM53-202ENST00000372237 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 B4GALT5O43286 388 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 TRUB2O95900 331 aaKnown RBP20■□□□□ 0.79
TMEM53-202ENST00000372237 CXCL8P10145 99 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 EDNRBP24530 442 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 EPHB2P29323 1055 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ELK3P41970 407 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 PRKG1Q13976 671 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ANKRD20A2Q5SQ80 823 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ANKRD20A1Q5TYW2 823 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ANKRD20A3Q5VUR7 823 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 LONP2Q86WA8 852 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ZNF276Q8N554 614 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 FAM13CQ8NE31 585 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 ZNF570Q96NI8 536 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 RPF1Q9H9Y2 349 aaKnown RBP20■□□□□ 0.79
TMEM53-202ENST00000372237 ANK1P16157 1881 aa20■□□□□ 0.79
TMEM53-202ENST00000372237 IQANK1A0A1B0GTG1 560 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ACKR2O00590 384 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 LPXNO60711 386 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 MT-ND3P03897 115 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 TSHRP16473 764 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 PTPN11Q06124 597 aaPredicted RBP19.99■□□□□ 0.79
TMEM53-202ENST00000372237 PTK7Q13308 1070 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ACAP1Q15027 740 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 EEF1DP3Q658K8 133 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 DARS2Q6PI48 645 aaKnown RBP19.99■□□□□ 0.79
TMEM53-202ENST00000372237 DLK2Q6UY11 383 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 LBX2Q6XYB7 198 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ZC3H18Q86VM9 953 aaKnown RBP19.99■□□□□ 0.79
TMEM53-202ENST00000372237 SLC4A11Q8NBS3 891 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ALG13Q9NP73 1137 aaKnown RBP19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ASNSD1Q9NWL6 643 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 GJB1P08034 283 aa19.99■□□□□ 0.79
TMEM53-202ENST00000372237 STIP1P31948 543 aaKnown RBP19.99■□□□□ 0.79
TMEM53-202ENST00000372237 ROR1Q01973 937 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms