RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TSPY1Q01534 308 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 CCDC142Q17RM4 750 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 FAM35AQ86V20 835 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 PIGZQ86VD9 579 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 KCTD13Q8WZ19 329 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 KRT82Q9NSB4 513 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 ADAM28Q9UKQ2 775 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 ABHD14A-ACY1A0A1B0GW23 586 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 CCDC188H7C350 402 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 KRIT1O00522 736 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 SYN3O14994 580 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 TUBBP07437 444 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 RHOXF2BP0C7M4 288 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 CLEC20AQ6ZU45 233 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 LRRC43Q8N309 656 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 EMC1Q8N766 993 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 RHOXF2Q9BQY4 288 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 PRDM5Q9NQX1 630 aaPredicted RBP27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 FAN1Q9Y2M0 1017 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 MICAL3Q7RTP6 2002 aa27.65■■■□□ 2.02
ATPAF1-202ENST00000371937 GABBR2O75899 941 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 ZNF143P52747 638 aaPredicted RBP27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 TAS2R40P59535 323 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 DAB2IPQ5VWQ8 1189 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 KATNAL2Q8IYT4 538 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 SMARCD1Q96GM5 515 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 ANKZF1Q9H8Y5 726 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 ASNSD1Q9NWL6 643 aa27.64■■■□□ 2.02
ATPAF1-202ENST00000371937 AP1G2O75843 785 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 OAZ2O95190 189 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 LCP1P13796 627 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 RAG1P15918 1043 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 GPD1P21695 349 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 VWCEQ96DN2 955 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 EPC1Q9H2F5 836 aa27.64■■■□□ 2.01
ATPAF1-202ENST00000371937 GOLGA6L10A0A0M3HER8 536 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 TRIM43BA6NCK2 446 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 C2CD4BA6NLJ0 364 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 RNF8O76064 485 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 DESP17661 470 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 GLE1Q53GS7 698 aaKnown RBP27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 ARCQ7LC44 396 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 OR10T2Q8NGX3 314 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 MYLPFQ96A32 169 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 TRIM43Q96BQ3 446 aaPredicted RBP27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 CNPY3Q9BT09 278 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 UBXN6Q9BZV1 441 aa27.63■■■□□ 2.01
ATPAF1-202ENST00000371937 TARSL2A2RTX5 802 aaKnown RBP27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 EFCAB14O75071 495 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 UPP2O95045 317 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 PDGFRAP16234 1089 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 MAP3K7CLP57077 242 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 HADHQ16836 314 aaKnown RBP27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 SLC26A9Q7LBE3 791 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 TMEM199Q8N511 208 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 PIWIL1Q96J94 861 aaKnown RBP27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 PKMYT1Q99640 499 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 AP1M1Q9BXS5 423 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 PARD6BQ9BYG5 372 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 LRRC4Q9HBW1 653 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 BEST1O76090 585 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 ZRANB2O95218 330 aaKnown RBP eCLIP27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 SLC11A1P49279 550 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 ELAVL2Q12926 359 aaKnown RBP27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 PPP2R5EQ16537 467 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 MFSD5Q6N075 450 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 POLNQ7Z5Q5 900 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 EXD1Q8NHP7 514 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 RXFP2Q8WXD0 754 aa27.62■■■□□ 2.01
ATPAF1-202ENST00000371937 SF3B1O75533 1304 aaKnown RBP eCLIP27.61■■■□□ 2.014e-6■■■■■ 120.3
ATPAF1-202ENST00000371937 CETN2P41208 172 aa27.61■■■□□ 2.01
ATPAF1-202ENST00000371937 EFHC1Q5JVL4 640 aa27.61■■■□□ 2.01
ATPAF1-202ENST00000371937 AADACL2Q6P093 401 aa27.61■■■□□ 2.01
ATPAF1-202ENST00000371937 ARGLU1Q9NWB6 273 aaPredicted RBP27.61■■■□□ 2.01
ATPAF1-202ENST00000371937 DDX56Q9NY93 547 aaKnown RBP27.61■■■□□ 2.01
ATPAF1-202ENST00000371937 DPYSL4O14531 572 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 LRCH4O75427 683 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 GRAP2O75791 330 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 DGKIO75912 1065 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 GALTP07902 379 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 CSF2RAP15509 400 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 ITGB8P26012 769 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 FLT3P36888 993 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 ADIGQ0VDE8 80 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 C8orf74Q6P047 294 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 C4orf50Q6ZRC1 276 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 SLC13A5Q86YT5 568 aaPredicted RBP27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 SIX6OS1Q8N1H7 587 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 KHSRPQ92945 711 aaKnown RBP eCLIP27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 SMOQ99835 787 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 CSNK1G1Q9HCP0 422 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 MTUS1Q9ULD2 1270 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 FNDC1Q4ZHG4 1894 aaPredicted RBP27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 AMHP03971 560 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 KRT7P08729 469 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 RCOR2Q8IZ40 523 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 TOP1MTQ969P6 601 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 RBM41Q96IZ5 413 aaKnown RBP27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 KRT12Q99456 494 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms