RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 RHBDF2Q6PJF5 856 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PYROXD1Q8WU10 500 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 NT5C1AQ9BXI3 368 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 NKIRAS1Q9NYS0 192 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 A0A1W2PPM1 405 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 SIGLEC16A6NMB1 481 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 ASAP2O43150 1006 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 GAS2O43903 313 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 RARBP10826 455 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 P4HA1P13674 534 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
PDE6C-201ENST00000371447 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 OSBPL7Q9BZF2 842 aa12.32□□□□□ -0.44
PDE6C-201ENST00000371447 WDR81Q562E7 1941 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 IL18RAPO95256 599 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 KLRC2P26717 231 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 GPD2P43304 727 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 YWHAGP61981 247 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 FNBP1LQ5T0N5 605 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TRNP1Q6NT89 227 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CTU1Q7Z7A3 348 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 UBR7Q8N806 425 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CCDC197Q8NCU1 140 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 DNM1LO00429 736 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 RECQL4O94761 1208 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 RPL22P35268 128 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 NUMBP49757 651 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 SLC26A2P50443 739 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 HIF1AQ16665 826 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 DGKDQ16760 1214 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CA9Q16790 459 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 PPTC7Q8NI37 304 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 FAM172AQ8WUF8 416 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CFAP36Q96G28 342 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 ZFP42Q96MM3 310 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 PTPN18Q99952 460 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TMPRSS4Q9NRS4 437 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 HAUS2Q9NVX0 235 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CLDN5O00501 218 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 DNALI1O14645 258 aaPredicted RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 MAGEB2O15479 319 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TREHO43280 583 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 KRT7P08729 469 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 MCF2P10911 925 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 CA4P22748 312 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 DNAJC3Q13217 504 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 SEPT7Q16181 437 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 EXOC8Q8IYI6 725 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 P3H4Q92791 437 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 MAML3Q96JK9 1138 aa12.31□□□□□ -0.44
PDE6C-201ENST00000371447 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 DHX35Q9H5Z1 703 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 XPO7Q9UIA9 1087 aaKnown RBP12.31□□□□□ -0.44
PDE6C-201ENST00000371447 MCF2LO15068 1137 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 KCNN4O15554 427 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 MMP3P08254 477 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 PSEN1P49768 467 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 SLC25A11Q02978 314 aaKnown RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 IFRD2Q12894 506 aaPredicted RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 HIBCHQ6NVY1 386 aaPredicted RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 ADAM32Q8TC27 787 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 RAB6BQ9NRW1 208 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 HTTP42858 3142 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 HMGCRP04035 888 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 TWF2Q6IBS0 349 aaKnown RBP12.3□□□□□ -0.44
PDE6C-201ENST00000371447 CENPUQ71F23 418 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 ANKS4BQ8N8V4 417 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 FBXO36Q8NEA4 188 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 SLCO1B3Q9NPD5 702 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
PDE6C-201ENST00000371447 TCRBV5S1A1TA0A578 114 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 MEIS3P2A8K0S8 358 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 APRTP07741 180 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 GPD1P21695 349 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms