RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TMEM30AQ9NV96 361 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 A0A1W2PQC6 194 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 SLC38A8A6NNN8 435 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 FOXN3O00409 490 aaPredicted RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CSH1P0DML2 217 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CSH2P0DML3 217 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 FSHRP23945 695 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 EPHA5P54756 1037 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 POLR2FP61218 127 aaKnown RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 DRAP1Q14919 205 aaPredicted RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 TJAP1Q5JTD0 557 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 HS6ST3Q8IZP7 471 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 KCNK16Q96T55 309 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 SMOQ99835 787 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 DUSP16Q9BY84 665 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CSNK1G1Q9HCP0 422 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 DOCK6Q96HP0 2047 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 O00370 1275 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 ZNF197O14709 1029 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 EPHB6O15197 1021 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 NRDCO43847 1150 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 HMGA1P17096 107 aaKnown RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 NPR3P17342 541 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 MAP3K7CLP57077 242 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 STILQ15468 1287 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CNGA2Q16280 664 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 GOLGA7BQ2TAP0 167 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CLEC20AQ6ZU45 233 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 TMC8Q8IU68 726 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 LRRC8AQ8IWT6 810 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 FAM71AQ8IYT1 594 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 ANKRD52Q8NB46 1076 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 KIAA1524Q8TCG1 905 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 TFAP2BQ92481 460 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 GPR88Q9GZN0 384 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 EHD2Q9NZN4 543 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 HESX1Q9UBX0 185 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 TSPAN16Q9UKR8 245 aa16.86■□□□□ 0.29
PFDN4-201ENST00000371419 MRPS23Q9Y3D9 190 aaKnown RBP16.86■□□□□ 0.29
PFDN4-201ENST00000371419 CYP26A1O43174 497 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 BEST1O76090 585 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 FGF19O95750 216 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 MYL4P12829 197 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
PFDN4-201ENST00000371419 GNA15P30679 374 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 SLC8A3P57103 927 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 MTMR3Q13615 1198 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 LCLAT1Q6UWP7 414 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 STKLD1Q8NE28 680 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 ITFG1Q8TB96 612 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
PFDN4-201ENST00000371419 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 ZNF334Q9HCZ1 680 aaPredicted RBP16.85■□□□□ 0.29
PFDN4-201ENST00000371419 NLRC4Q9NPP4 1024 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.85■□□□□ 0.29
PFDN4-201ENST00000371419 MAGED2Q9UNF1 606 aaPredicted RBP16.85■□□□□ 0.29
PFDN4-201ENST00000371419 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 NR2E1Q9Y466 385 aa16.85■□□□□ 0.29
PFDN4-201ENST00000371419 DENND4AQ7Z401 1863 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 NOTCH4Q99466 2003 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 F8VZ95 297 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 MICAL2O94851 1124 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 CALCAP01258 141 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 PNMA6AP0CW24 399 aaPredicted RBP16.84■□□□□ 0.29
PFDN4-201ENST00000371419 BCAT1P54687 386 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 BPIFB4P59827 614 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 PTK2Q05397 1052 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 PTPN21Q16825 1174 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 PRSS36Q5K4E3 855 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 GET4Q7L5D6 327 aaPredicted RBP16.84■□□□□ 0.29
PFDN4-201ENST00000371419 TTC30AQ86WT1 665 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 VSTM4Q8IW00 320 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 ADHFE1Q8IWW8 467 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 NUP93Q8N1F7 819 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 SPAG5Q96R06 1193 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 ZSWIM1Q9BR11 485 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
PFDN4-201ENST00000371419 UXTQ9UBK9 157 aaPredicted RBP16.84■□□□□ 0.29
PFDN4-201ENST00000371419 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
PFDN4-201ENST00000371419 MYH10P35580 1976 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 THAP12O43422 761 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 MED7O43513 233 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 RTN3O95197 1032 aaPredicted RBP16.83■□□□□ 0.28
PFDN4-201ENST00000371419 GABRR2P28476 465 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 CDC25CP30307 473 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 CCR2P41597 374 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 JAM2P57087 298 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
PFDN4-201ENST00000371419 ACSF2Q96CM8 615 aaPredicted RBP16.83■□□□□ 0.28
PFDN4-201ENST00000371419 TCEAL4Q96EI5 215 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms