RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZFP37Q9Y6Q3 630 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-204ENST00000370496 ZNF638Q14966 1978 aaKnown RBP15.71■□□□□ 0.11
COL9A1-204ENST00000370496 NUP210Q8TEM1 1887 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-204ENST00000370496 DENND4CQ5VZ89 1909 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 SERPINC1P01008 464 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 VDRP11473 427 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 HMGA1P17096 107 aaKnown RBP15.71■□□□□ 0.11
COL9A1-204ENST00000370496 NPR3P17342 541 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 ZNF132P52740 706 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 SLC5A3P53794 718 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 CYP4F8P98187 520 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 SYCP1Q15431 976 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 ARHGAP17Q68EM7 881 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 CLEC20AQ6ZU45 233 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 KCNK16Q96T55 309 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 SMOQ99835 787 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 LRRC3Q9BY71 257 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 FAM207AQ9NSI2 230 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-204ENST00000370496 EPS15L1Q9UBC2 864 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 AJAP1Q9UKB5 411 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-204ENST00000370496 TSPAN16Q9UKR8 245 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 KIAA1257Q9ULG3 409 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 FHOD1Q9Y613 1164 aa15.71■□□□□ 0.11
COL9A1-204ENST00000370496 MICAL2O94851 1124 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 RTN3O95197 1032 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-204ENST00000370496 LAMP2P13473 410 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 BRD2P25440 801 aaKnown RBP15.7■□□□□ 0.1
COL9A1-204ENST00000370496 KLK7P49862 253 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 BCAT1P54687 386 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 KLHDC7AQ5VTJ3 777 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 GAREM2Q75VX8 874 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 APTXQ7Z2E3 356 aaKnown RBP15.7■□□□□ 0.1
COL9A1-204ENST00000370496 NUP93Q8N1F7 819 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 SHC3Q92529 594 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 MCRS1Q96EZ8 462 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 COL25A1Q9BXS0 654 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-204ENST00000370496 GDE1Q9NZC3 331 aa15.7■□□□□ 0.1
COL9A1-204ENST00000370496 M0QYV0 167 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 RNF225M0QZC1 329 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-204ENST00000370496 O00370 1275 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 BEST1O76090 585 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 UCHL3P15374 230 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 GNA15P30679 374 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 USP46P62068 366 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 STILQ15468 1287 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 STXBP5Q5T5C0 1151 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 GPR158Q5T848 1215 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 RNF135Q8IUD6 432 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 NEK11Q8NG66 645 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 MRPS31Q92665 395 aaKnown RBP15.69■□□□□ 0.1
COL9A1-204ENST00000370496 FBXO32Q969P5 355 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 MYRFLQ96LU7 910 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 SLITRK1Q96PX8 696 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 DUSP16Q9BY84 665 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 IL21Q9HBE4 155 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 CSNK1G1Q9HCP0 422 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 PNPLA8Q9NP80 782 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 CD320Q9NPF0 282 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 PLCB1Q9NQ66 1216 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 LIMD1Q9UGP4 676 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 CNTN6Q9UQ52 1028 aa15.69■□□□□ 0.1
COL9A1-204ENST00000370496 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 NRG2O14511 850 aaPredicted RBP15.68■□□□□ 0.1
COL9A1-204ENST00000370496 THAP12O43422 761 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 MOSPD3O75425 235 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 CALCAP01258 141 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 ASGR2P07307 311 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 PNMA6AP0CW24 399 aaPredicted RBP15.68■□□□□ 0.1
COL9A1-204ENST00000370496 YWHAQP27348 245 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 ZNF445P59923 1031 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 BST2Q10589 180 aaKnown RBP15.68■□□□□ 0.1
COL9A1-204ENST00000370496 MTSS1LQ765P7 747 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 TTC30AQ86WT1 665 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 TFAP2BQ92481 460 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 ERGIC2Q96RQ1 377 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 TTLL2Q9BWV7 592 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 GANQ9H2C0 597 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 TRPC7Q9HCX4 862 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL9A1-204ENST00000370496 SIK3Q9Y2K2 1263 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 DAAM1Q9Y4D1 1078 aa15.68■□□□□ 0.1
COL9A1-204ENST00000370496 HELZP42694 1942 aaKnown RBP15.67■□□□□ 0.1
COL9A1-204ENST00000370496 MED7O43513 233 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 TADA3O75528 432 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 SETSIPP0DME0 302 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 DDX6P26196 483 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL9A1-204ENST00000370496 POLR2FP61218 127 aaKnown RBP15.67■□□□□ 0.1
COL9A1-204ENST00000370496 DRAP1Q14919 205 aaPredicted RBP15.67■□□□□ 0.1
COL9A1-204ENST00000370496 LCLAT1Q6UWP7 414 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 GPRIN1Q7Z2K8 1008 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 PDZD8Q8NEN9 1154 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 ST13P5Q8NFI4 369 aaPredicted RBP15.67■□□□□ 0.1
COL9A1-204ENST00000370496 SCAMP5Q8TAC9 235 aa15.67■□□□□ 0.1
COL9A1-204ENST00000370496 ZSCAN18Q8TBC5 510 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms