RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 WDR24Q96S15 920 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 EIF3CQ99613 913 aaKnown RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 HAPLN2Q9GZV7 340 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 EPC1Q9H2F5 836 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 PRMT8Q9NR22 394 aaPredicted RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZSCAN32Q9NX65 697 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 DNAJC12Q9UKB3 198 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 AGO2Q9UKV8 859 aaKnown RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 PATJQ8NI35 1801 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZNF263O14978 683 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 FANCGO15287 622 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 EXTL3O43909 919 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 KIF5CO60282 957 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 MICAL2O94851 1124 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 KCNE1P15382 129 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 CASQ1P31415 396 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ACOT2P49753 483 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 KRT83P78385 493 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 GFPT1Q06210 699 aaPredicted RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 ADCY1Q08828 1119 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 KLHL30Q0D2K2 578 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 CETN1Q12798 172 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 MTAPQ13126 283 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 SPA17Q15506 151 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ARHGAP44Q17R89 818 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 SEZ6Q53EL9 994 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZNF569Q5MCW4 686 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 LMBRD2Q68DH5 695 aaPredicted RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZNF852Q6ZMS4 543 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 EHBP1Q8NDI1 1231 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 SYN2Q92777 582 aaPredicted RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 ZSWIM3Q96MP5 696 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 ASB16Q96NS5 453 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM3-210ENST00000368530 MRPL4Q9BYD3 311 aaKnown RBP10.63□□□□□ -0.71
TPM3-210ENST00000368530 FBXL5Q9UKA1 691 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 GUCA1BQ9UMX6 200 aa10.63□□□□□ -0.71
TPM3-210ENST00000368530 NCANO14594 1321 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 PODXLO00592 558 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 SYN3O14994 580 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 GFPT2O94808 682 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 PIGRP01833 764 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 STAT1P42224 750 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 JAM2P57087 298 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 OSTNP61366 133 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 SLFN12LQ6IEE8 588 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 ARHGEF19Q8IW93 802 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 TMEM130Q8N3G9 435 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 PARD3BQ8TEW8 1205 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 DNASE1L2Q92874 299 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 C18orf25Q96B23 403 aaPredicted RBP10.62□□□□□ -0.71
TPM3-210ENST00000368530 ELMO3Q96BJ8 720 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 CORO1BQ9BR76 489 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 TCHPQ9BT92 498 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
TPM3-210ENST00000368530 HAUS4Q9H6D7 363 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 TRPV5Q9NQA5 729 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 AIPL1Q9NZN9 384 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 APEX2Q9UBZ4 518 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 PCDHA13Q9Y5I0 950 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
TPM3-210ENST00000368530 MYH10P35580 1976 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 MIA3Q5JRA6 1907 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 ARNTLO00327 626 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 URI1O94763 535 aaPredicted RBP10.61□□□□□ -0.71
TPM3-210ENST00000368530 VNN2O95498 520 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 TUBB4AP04350 444 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 SCP2P22307 547 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 ATXN1P54253 815 aaKnown RBP10.61□□□□□ -0.71
TPM3-210ENST00000368530 EPHA5P54756 1037 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 WNT7BP56706 349 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 GRM2Q14416 872 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 DRAP1Q14919 205 aaPredicted RBP10.61□□□□□ -0.71
TPM3-210ENST00000368530 TPGS2Q68CL5 300 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 VITQ6UXI7 678 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 IRF2BP2Q7Z5L9 587 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 SLC35F6Q8N357 371 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 MYRIPQ8NFW9 859 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 SEMA4DQ92854 862 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 SUSD3Q96L08 255 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 LRRC3Q9BY71 257 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 LACRTQ9GZZ8 138 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 TRPV4Q9HBA0 871 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 CYP4F11Q9HBI6 524 aa10.61□□□□□ -0.71
TPM3-210ENST00000368530 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms