RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 LRG1P02750 347 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 BDNFP23560 247 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
EFNA1-201ENST00000368406 GRIK1P39086 918 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ALDH1A3P47895 512 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
EFNA1-201ENST00000368406 DUSP4Q13115 394 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 TAF12Q16514 161 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
EFNA1-201ENST00000368406 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 FAM171BQ6P995 826 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 FUBP3Q96I24 572 aaKnown RBP eCLIP13.4□□□□□ -0.268e-7■■■■□ 26.5
EFNA1-201ENST00000368406 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 PIDD1Q9HB75 910 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ABCB6Q9NP58 842 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 ACP6Q9NPH0 428 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 TRIOO75962 3097 aa13.4□□□□□ -0.26
EFNA1-201ENST00000368406 TRIM66O15016 1216 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 SEC24AO95486 1093 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CYP11B1P15538 503 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CYP2F1P24903 491 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CLCN1P35523 988 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 BCAT1P54687 386 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 RPL10AP62906 217 aaKnown RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 PLD1Q13393 1074 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 PKMYT1Q99640 499 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 IMPACTQ9P2X3 320 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 INSL5Q9Y5Q6 135 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CLUHO75153 1309 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 PTPRDP23468 1912 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 CCL16O15467 120 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 SOAT2O75908 522 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 MICAL2O94851 1124 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 VNN2O95498 520 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 MAP3K7CLP57077 242 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 DENND4AQ7Z401 1863 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 VPS36Q86VN1 386 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 TTC9BQ8N6N2 239 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 EPS8L1Q8TE68 723 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 TFAP2BQ92481 460 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 HNRNPABQ99729 332 aaKnown RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.272e-9■■■■■ 53.1
EFNA1-201ENST00000368406 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
EFNA1-201ENST00000368406 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
EFNA1-201ENST00000368406 O00370 1275 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 PTMAP06454 111 aaKnown RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 HAPLN1P10915 354 aaPredicted RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 NPR3P17342 541 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 MAGEA11P43364 429 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 EPHB3P54753 998 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 TWF1Q12792 350 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 TBX2Q13207 712 aaPredicted RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 CNGA2Q16280 664 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 LCLAT1Q6UWP7 414 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 GRASPQ7Z6J2 395 aaPredicted RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 ACSF2Q96CM8 615 aaPredicted RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 NOX5Q96PH1 765 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 AIPL1Q9NZN9 384 aa13.38□□□□□ -0.27
EFNA1-201ENST00000368406 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
EFNA1-201ENST00000368406 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 C2CD4DB7Z1M9 353 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 F8VP50 259 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 SERPING1P05155 500 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 MMEP08473 750 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms