RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 STX3Q13277 289 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 CAPSQ13938 189 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 NFIL3Q16649 462 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 RASIP1Q5U651 963 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 C1orf146Q5VVC0 180 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 LVRNQ6Q4G3 990 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 STKLD1Q8NE28 680 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 KRT35Q92764 455 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 CCDC124Q96CT7 223 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 TASP1Q9H6P5 420 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 DNAJC6O75061 913 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 KDSRQ06136 332 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 MCL1Q07820 350 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 BST2Q10589 180 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SNX17Q15036 470 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 DDIASQ8IXT1 998 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 FBXO32Q969P5 355 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 UPF3AQ9H1J1 476 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 RECQL4O94761 1208 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SPRP35270 261 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 HARS2P49590 506 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 UGP2Q16851 508 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 CTXN3Q4LDR2 81 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 FBXO36Q8NEA4 188 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 MIPOL1Q8TD10 442 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 ELMO2Q96JJ3 720 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 WWP1Q9H0M0 922 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 PPME1Q9Y570 386 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 RPS6KL1Q9Y6S9 549 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SPATA31C2B4DYI2 1134 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SPAG6O75602 509 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 RARGP13631 454 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SERPINB9P50453 376 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 ALDH18A1P54886 795 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 PTENP60484 403 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 IMPG1Q17R60 797 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 TDRD10Q5VZ19 366 aaKnown RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 LRRC6Q86X45 466 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 BAP1Q92560 729 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 ZBTB18Q99592 522 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 GANQ9H2C0 597 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 TRIM33Q9UPN9 1127 aa12.8□□□□□ -0.36
PTPRK-203ENST00000368207 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-203ENST00000368207 SMAPO00193 183 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 MEFVO15553 781 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PJA2O43164 708 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 HADHAP40939 763 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 DNAJC3Q13217 504 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PDK2Q15119 407 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 CCNG2Q16589 344 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 MFSD7Q6UXD7 560 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 CREG2Q8IUH2 290 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 MAP3K7O43318 606 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 TLR2O60603 784 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 SMIM24O75264 130 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 RARAP10276 462 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 TNFSF9P41273 254 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ACTN3Q08043 901 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 TAF2Q6P1X5 1199 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 DEFB128Q7Z7B8 93 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 XAB2Q9HCS7 855 aaKnown RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ADA2Q9NZK5 511 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 SLC39A10Q9ULF5 831 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 AP3B1O00203 1094 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PSMD3O43242 534 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 MTSS1O43312 755 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 CAND2O75155 1236 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 MICAL2O94851 1124 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 KRT4P19013 534 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 GEMIN4P57678 1058 aaKnown RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 NLGN2Q8NFZ4 835 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 GAD1Q99259 594 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 CEP41Q9BYV8 373 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-203ENST00000368207 PDGFCQ9NRA1 345 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 ANGPTL2Q9UKU9 493 aa12.79□□□□□ -0.36
PTPRK-203ENST00000368207 NDUFS3O75489 264 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms