RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 A0A1B0GW55 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 GLRA3O75311 464 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L2P0CJ85 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L3P0CJ86 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L4P0CJ87 422 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L5P0CJ88 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L6P0CJ89 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4L7P0CJ90 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 CYP11B2P19099 503 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 STILQ15468 1287 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 XKR3Q5GH77 459 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 NT5DC3Q86UY8 548 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DUX4Q9UBX2 424 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 GRIN2DO15399 1336 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 CHD1O14646 1710 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 ECE2O60344 883 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 RARAP10276 462 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 JAK1P23458 1154 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 SSTR3P32745 418 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 PPP4CP60510 307 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 FOXD4Q12950 439 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 KYAT1Q16773 422 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 RIPOR1Q6ZS17 1223 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 KYQ8NBH2 561 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 RBM46Q8TBY0 533 aaKnown RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 PPP1R14BQ96C90 147 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-202ENST00000367503 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
SHPRH-202ENST00000367503 TTKP33981 857 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 C11orf63Q6NUN7 778 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TTC27Q6P3X3 843 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 MAD2L2Q9UI95 211 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 LYNP07948 512 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 ALADP13716 330 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 ZNF23P17027 643 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 SEC23AQ15436 765 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 NEDD8Q15843 81 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TTLL6Q8N841 843 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 MAGED4Q96JG8 741 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 PSTPIP1O43586 416 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TSPAN9O75954 239 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TFE3P19532 575 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 SPRP35270 261 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 RAD21L1Q9H4I0 556 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 IL1RL2Q9HB29 575 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 PPRC1Q5VV67 1664 aaKnown RBP12.72□□□□□ -0.37
SHPRH-202ENST00000367503 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 UPP2O95045 317 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 LPIN1Q14693 890 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 TAS2R42Q7RTR8 314 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 PID1Q7Z2X4 250 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 ASAP3Q8TDY4 903 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 STMN3Q9NZ72 180 aa12.72□□□□□ -0.37
SHPRH-202ENST00000367503 E2F8A0AVK6 867 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.37
SHPRH-202ENST00000367503 DNAAF5Q86Y56 855 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 ABI1Q8IZP0 508 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 E9PBE3 544 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 KLHL41O60662 606 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 CST8O60676 142 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 PYGMP11217 842 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 CDK7P50613 346 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 XIAPP98170 497 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 NCOA4Q13772 614 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 MOXD1Q6UVY6 613 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 POU5F2Q8N7G0 328 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 PLEKHG4BQ96PX9 1271 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 EBF2Q9HAK2 575 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 SESN1Q9Y6P5 492 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
SHPRH-202ENST00000367503 SNX2O60749 519 aa12.71□□□□□ -0.38
SHPRH-202ENST00000367503 NTSR2O95665 410 aa12.71□□□□□ -0.38
SHPRH-202ENST00000367503 SLC4A1P02730 911 aa12.71□□□□□ -0.38
SHPRH-202ENST00000367503 ADRA1DP25100 572 aa12.71□□□□□ -0.38
SHPRH-202ENST00000367503 SOX11P35716 441 aa12.71□□□□□ -0.38
SHPRH-202ENST00000367503 NFIXQ14938 502 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms