RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 ACSF2Q96CM8 615 aaPredicted RBP10.48□□□□□ -0.73
NUP43-202ENST00000367402 SMARCD1Q96GM5 515 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 C8orf48Q96LL4 319 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 FAM81BQ96LP2 452 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
NUP43-202ENST00000367402 KREMEN1Q96MU8 473 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 KCNK16Q96T55 309 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 UHRF1Q96T88 793 aaPredicted RBP10.48□□□□□ -0.73
NUP43-202ENST00000367402 LSM14BQ9BX40 385 aaKnown RBP10.48□□□□□ -0.73
NUP43-202ENST00000367402 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 KRT82Q9NSB4 513 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 DNAJC12Q9UKB3 198 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
NUP43-202ENST00000367402 TSC2P49815 1807 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 C2CD4DB7Z1M9 353 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 FGF19O95750 216 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 SERPINC1P01008 464 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 FAM200BP0CF97 657 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 KRT5P13647 590 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 CD19P15391 556 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 GJA1P17302 382 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 CACNA2D1P54289 1103 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 MAP3K7CLP57077 242 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 SLC5A9Q2M3M2 681 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 FILIP1LQ4L180 1135 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 SGO2Q562F6 1265 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 PPP1R26Q5T8A7 1209 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 GJD3Q8N144 294 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 UBR7Q8N806 425 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 TDRD5Q8NAT2 981 aaKnown RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 ING5Q8WYH8 240 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 JAKMIP2Q96AA8 810 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 TCEAL4Q96EI5 215 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 SPATA17Q96L03 361 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 MYADMQ96S97 322 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 ATXN3LQ9H3M9 355 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 ZNF334Q9HCZ1 680 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 SIX2Q9NPC8 291 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 DMAP1Q9NPF5 467 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 AVENQ9NQS1 362 aaPredicted RBP10.47□□□□□ -0.73
NUP43-202ENST00000367402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.47□□□□□ -0.73
NUP43-202ENST00000367402 RABGEF1Q9UJ41 708 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 KIAA1257Q9ULG3 409 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 UNC80Q8N2C7 3258 aa10.47□□□□□ -0.73
NUP43-202ENST00000367402 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 LOC730098B7Z3J9 87 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 PAEPP09466 180 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 VDRP11473 427 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 HMGA1P17096 107 aaKnown RBP10.46□□□□□ -0.73
NUP43-202ENST00000367402 GABRR2P28476 465 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 CCR2P41597 374 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 EPHA5P54756 1037 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 SLC8A3P57103 927 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 IFRD2Q12894 506 aaPredicted RBP10.46□□□□□ -0.73
NUP43-202ENST00000367402 RAPGEF1Q13905 1077 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 SYCP1Q15431 976 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 PRSS36Q5K4E3 855 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 KLHDC7AQ5VTJ3 777 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 DENND5BQ6ZUT9 1274 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
NUP43-202ENST00000367402 TMC8Q8IU68 726 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 FGF13Q92913 245 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 CEP295NLQ96MC4 621 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 GCNAQ96QF7 691 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 SMOQ99835 787 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 LRRC3Q9BY71 257 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 SLITRK6Q9H5Y7 841 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 FAM207AQ9NSI2 230 aaPredicted RBP10.46□□□□□ -0.73
NUP43-202ENST00000367402 TMEM30AQ9NV96 361 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 EHD2Q9NZN4 543 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 UXTQ9UBK9 157 aaPredicted RBP10.46□□□□□ -0.73
NUP43-202ENST00000367402 HESX1Q9UBX0 185 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
NUP43-202ENST00000367402 MOSPD3O75425 235 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 BEST1O76090 585 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 NOL4O94818 638 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 MICAL2O94851 1124 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 CALCAP01258 141 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 LAMP2P13473 410 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 UCHL3P15374 230 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 CEBPBP17676 345 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 BRD2P25440 801 aaKnown RBP10.45□□□□□ -0.74
NUP43-202ENST00000367402 CDC25CP30307 473 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 KLK7P49862 253 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 TEAD2Q15562 447 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 GOLGA7BQ2TAP0 167 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 ARHGAP15Q53QZ3 475 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 ARHGAP17Q68EM7 881 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 DPY19L2P1Q6NXN4 242 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 CLEC20AQ6ZU45 233 aa10.45□□□□□ -0.74
NUP43-202ENST00000367402 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms