RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TSSK1BQ9BXA7 367 aa12.91□□□□□ -0.34
PTPN7-202ENST00000367279 SMYD3Q9H7B4 428 aa12.91□□□□□ -0.34
PTPN7-202ENST00000367279 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-202ENST00000367279 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 MSCO60682 206 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 FAM155BO75949 473 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ERBB2P04626 1255 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 PYGBP11216 843 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 BGNP21810 368 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 KRT81Q14533 505 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 RAB6CQ53S08 254 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 IGDCC3Q8IVU1 814 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 TRIM55Q9BYV6 548 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 RAB6CQ9H0N0 254 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 MED7O43513 233 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 FARP2O94887 1054 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 UPP2O95045 317 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ITGB3P05106 788 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ALADP13716 330 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ASPAP45381 313 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 RGS7P49802 495 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 CLCN3P51790 818 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 EFNA5P52803 228 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ARFIP2P53365 341 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ROR1Q01973 937 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ENPEPQ07075 957 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 MDH1BQ5I0G3 518 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 PTPRN2Q92932 1015 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 SLC13A1Q9BZW2 595 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 LRMDAQ9H2I8 198 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 FBXO6Q9NRD1 293 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 RAB6BQ9NRW1 208 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-202ENST00000367279 USP18Q9UMW8 372 aa12.9□□□□□ -0.34
PTPN7-202ENST00000367279 SIGLEC16A6NMB1 481 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 PDHA1P08559 390 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 SKIV2L2P42285 1042 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 CPA2P48052 419 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 AP3M2P53677 418 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 OAZ1P54368 228 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 ZPBP2Q6X784 338 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 MCUR1Q96AQ8 359 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 CYTH2Q99418 400 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 ASCC2Q9H1I8 757 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 HAUS5O94927 633 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 PGK2P07205 417 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 KITP10721 976 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 IRX4P78413 519 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 PPP1R15BQ5SWA1 713 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 BZW1Q7L1Q6 419 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 IQANK1A0A1B0GTG1 560 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 MAGEB2O15479 319 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 KCNN4O15554 427 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 MAFO75444 373 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 NFICP08651 508 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 T-ENOLP0DO92 83 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 SERPINB3P29508 390 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 APBB1IPQ7Z5R6 666 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 WDR83Q9BRX9 315 aaKnown RBP12.89□□□□□ -0.35
PTPN7-202ENST00000367279 MAD1L1Q9Y6D9 718 aa12.89□□□□□ -0.35
PTPN7-202ENST00000367279 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 NDC80O14777 642 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 HOXC6P09630 235 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 ZNF200P98182 395 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 CRYMQ14894 314 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 SLC7A6OSQ96CW6 309 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 SERAC1Q96JX3 654 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 MARCOQ9UEW3 520 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 GYG2O15488 501 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms