RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 DAB2IPQ5VWQ8 1189 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 ACBD6Q9BR61 282 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 MAGED2Q9UNF1 606 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-213ENST00000366740 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
MRPL55-213ENST00000366740 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-213ENST00000366740 IL18RAPO95256 599 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 USP17L7P0C7H9 530 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CEACAM1P13688 526 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 PFKFB1P16118 471 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 IFNAR2P48551 515 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 DGKEP52429 567 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 WNT7BP56706 349 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 ASIC1P78348 528 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 AMPD3Q01432 767 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 SH3PXD2AQ5TCZ1 1133 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CCDC65Q8IXS2 484 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 PDCL2Q8N4E4 241 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 SPATA18Q8TC71 538 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
MRPL55-213ENST00000366740 ACCSQ96QU6 501 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 TMEM9BQ9NQ34 198 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 WNT6Q9Y6F9 365 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
MRPL55-213ENST00000366740 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 TMEM8BA6NDV4 472 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 KHNYNO15037 678 aaKnown RBP12.49□□□□□ -0.41
MRPL55-213ENST00000366740 KLRC4O43908 158 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 CKMP06732 381 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 SLFN14P0C7P3 912 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 CYP2F1P24903 491 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 GBP1P32455 592 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 OPRD1P41143 372 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 FOXC1Q12948 553 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 PSMD2Q13200 908 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 DDR2Q16832 855 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 GAB4Q2WGN9 574 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-213ENST00000366740 GATA6Q92908 595 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
MRPL55-213ENST00000366740 CYP2S1Q96SQ9 504 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-213ENST00000366740 GOLPH3LQ9H4A5 285 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 TRPC7Q9HCX4 862 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 DDX43Q9NXZ2 648 aaKnown RBP12.49□□□□□ -0.41
MRPL55-213ENST00000366740 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 ATRXP46100 2492 aa12.49□□□□□ -0.41
MRPL55-213ENST00000366740 DMXL2Q8TDJ6 3036 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 K7EQS6 105 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 GABRDO14764 452 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 NFATC1O95644 943 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ITGB3P05106 788 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 PFKLP17858 780 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 BCKDHBP21953 392 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ACAT1P24752 427 aaKnown RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 POLR2BP30876 1174 aaKnown RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 NDUFA8P51970 172 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 MYL7Q01449 175 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 NR1H3Q13133 447 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 POSTNQ15063 836 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 CCDC142Q17RM4 750 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 USP39Q53GS9 565 aaKnown RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 SCARA3Q6AZY7 606 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 OSTM1Q86WC4 334 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 LRRC52Q8N7C0 313 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 KIAA1958Q8N8K9 716 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 POMGNT1Q8WZA1 660 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms