RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CHST8Q9H2A9 424 aa3.93□□□□□ -1.78
RNU4-48P-201ENST00000365559 ARHGEF3Q9NR81 526 aa3.93□□□□□ -1.78
RNU4-48P-201ENST00000365559 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
RNU4-48P-201ENST00000365559 CDY1Q9Y6F8 540 aa3.93□□□□□ -1.78
RNU4-48P-201ENST00000365559 SPATA31A6Q5VVP1 1343 aa3.93□□□□□ -1.78
RNU4-48P-201ENST00000365559 KAT6AQ92794 2004 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 FER1L4A9Z1Z3 1794 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 LOC102723971A0A1B0GUV8 181 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 APAF1O14727 1248 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 TXNP10599 105 aaKnown RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 WT1P19544 449 aaPredicted RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 CYP2C18P33260 490 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 PIK3CBP42338 1070 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 PTDSS1P48651 473 aaKnown RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 ALDH9A1P49189 494 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 CCT8P50990 548 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 ITGA8P53708 1063 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 HTRA4P83105 476 aaPredicted RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 NPY5RQ15761 445 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 CACHD1Q5VU97 1274 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 FCRL6Q6DN72 434 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 UNC13DQ70J99 1090 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 AMIGO2Q86SJ2 522 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 IZUMO1Q8IYV9 350 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 DNAJB14Q8TBM8 379 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 C17orf80Q9BSJ5 609 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 DLL3Q9NYJ7 618 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 DNMT3BQ9UBC3 853 aaKnown RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 MID2Q9UJV3 735 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 ITGB1BP2Q9UKP3 347 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 HDAC9Q9UKV0 1011 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 SNX13Q9Y5W8 968 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 COX11Q9Y6N1 276 aa3.92□□□□□ -1.78
RNU4-48P-201ENST00000365559 RHPN2P1A8MT19 583 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 H0YIZ8 118 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 GCOM1H8Y6P7 765 aaPredicted RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 RAB27BO00194 218 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 RRP9O43818 475 aaKnown RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SRGAP2O75044 1071 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 RASAL1O95294 804 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 ONECUT2O95948 504 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 MT-ND5P03915 603 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 TRIM27P14373 513 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 NDUFB7P17568 137 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 RPL17P18621 184 aaKnown RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 ACVR2AP27037 513 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 PDE1AP54750 535 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 ELLP55199 621 aaPredicted RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 INSCQ1MX18 579 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 HSP90AB2PQ58FF8 381 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SLC9A4Q6AI14 798 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 CAND1Q86VP6 1230 aaKnown RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SPARTQ8N0X7 666 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 LRRC71Q8N4P6 559 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 XAGE5Q8WWM1 108 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SOCS4Q8WXH5 440 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SARAFQ96BY9 339 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SNX22Q96L94 193 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 STRBPQ96SI9 672 aaKnown RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 TRIM5Q9C035 493 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 AS3MTQ9HBK9 375 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 DUSP22Q9NRW4 184 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 TRMT13Q9NUP7 481 aaKnown RBP3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 SH2B3Q9UQQ2 575 aa3.91□□□□□ -1.78
RNU4-48P-201ENST00000365559 ARHGEF17Q96PE2 2063 aaPredicted RBP3.9□□□□□ -1.78
RNU4-48P-201ENST00000365559 OVOL3O00110 214 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF213O14771 459 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 KPNA5O15131 536 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 PMM2O15305 246 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CCP110O43303 1012 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 RGS10O43665 173 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 PPFIA2O75334 1257 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 HNRNPCP07910 306 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 FAM163BP0C2L3 166 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 ENGP17813 658 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 BTF3P20290 206 aaKnown RBP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 GPD1P21695 349 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CTGFP29279 349 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CARSP49589 748 aaKnown RBP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 BCAT1P54687 386 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 EEFSECP57772 596 aaKnown RBP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 PROK1P58294 105 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF543Q08ER8 600 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CCNIQ14094 377 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 DAG1Q14118 895 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 ARHGEF7Q14155 803 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 SLC29A2Q14542 456 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 SAFBQ15424 915 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CYP1B1Q16678 543 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF750Q32MQ0 723 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 FAM153CQ494X1 144 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CERCAMQ5T4B2 595 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 KSR2Q6VAB6 950 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 DPY19L3Q6ZPD9 716 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 Q6ZWC4 215 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 CCAR1Q8IX12 1150 aaKnown RBP3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 YAF2Q8IY57 180 aa3.9□□□□□ -1.79
RNU4-48P-201ENST00000365559 PJA1Q8NG27 643 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms