RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SATB1Q01826 763 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 PLS1Q14651 629 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 FAM187BQ17R55 369 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 MEX3CQ5U5Q3 659 aaKnown RBP5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 EGFLAMQ63HQ2 1017 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 KIAA1161Q6NSJ0 714 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 SLC15A3Q8IY34 581 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 OSCP1Q8WVF1 389 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 XPR1Q9UBH6 696 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 PCDHA6Q9UN73 950 aa5.66□□□□□ -1.5
RNU4-40P-201ENST00000364351 TMEM232C9JQI7 657 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 GCATO75600 419 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 CSF1RP07333 972 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 HOXD9P28356 352 aaPredicted RBP5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 LRPAP1P30533 357 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 VIPR2P41587 438 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 CDKN1CP49918 316 aaPredicted RBP5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 E2F1Q01094 437 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 LY6KQ17RY6 165 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 RNASE12Q5GAN4 147 aaKnown RBP5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 KHDC1LQ5JSQ8 128 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 DPY19L3Q6ZPD9 716 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 CAND1Q86VP6 1230 aaKnown RBP5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 ZNF280BQ86YH2 543 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 SPATA3Q8NHX4 192 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 SLC35A4Q96G79 324 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 FOXP1Q9H334 677 aaPredicted RBP5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 CXorf36Q9H7Y0 433 aa5.65□□□□□ -1.5
RNU4-40P-201ENST00000364351 LY6G6EA0A0G2JKS1 128 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 VNN1O95497 513 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 A1BGP04217 495 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 NKX6-1P78426 367 aaPredicted RBP5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 MYO1EQ12965 1108 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 TWIST1Q15672 202 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 PGS1Q32NB8 556 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 C10orf25Q5T742 122 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 CCDC17Q96LX7 622 aa5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 FYTTD1Q96QD9 318 aaKnown RBP5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 SARS2Q9NP81 518 aaKnown RBP5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-40P-201ENST00000364351 FAM90A10PA6NDY2 464 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 ABLIM3O94929 683 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 POU2F2P09086 479 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 MYCLP12524 364 aaPredicted RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 MEPCEQ7L2J0 689 aaKnown RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 BCDIN3DQ7Z5W3 292 aaKnown RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 CATIPQ7Z7H3 387 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 IZUMO1Q8IYV9 350 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 CELF5Q8N6W0 485 aaKnown RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 MARK4Q96L34 752 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 MMS19Q96T76 1030 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 SMAD5Q99717 465 aaKnown RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 TRMT13Q9NUP7 481 aaKnown RBP5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 ASIC5Q9NY37 505 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 PI4KBQ9UBF8 816 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 TMX2Q9Y320 296 aa5.63□□□□□ -1.51
RNU4-40P-201ENST00000364351 CD8B2A6NJW9 211 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 ALPLP05186 524 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 RECQLP46063 649 aaPredicted RBP5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 UCP3P55916 312 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 EVA1CP58658 441 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 HTRA4P83105 476 aaPredicted RBP5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 KRT17Q04695 432 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 ZNF91Q05481 1191 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 ZIK1Q3SY52 487 aaPredicted RBP5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 SIRT6Q8N6T7 355 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 OSR1Q8TAX0 266 aaPredicted RBP5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 PRR25Q96S07 402 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
RNU4-40P-201ENST00000364351 PRR23D1E9PI22 279 aaPredicted RBP5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 MYO1CO00159 1063 aa5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 CES2O00748 559 aa5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 SNUPNO95149 360 aaKnown RBP5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 PRR23D2P0DMB1 279 aaPredicted RBP5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 ACRBPQ8NEB7 543 aa5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 SNX14Q9Y5W7 946 aa5.61□□□□□ -1.51
RNU4-40P-201ENST00000364351 BTBD19C9JJ37 291 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 H3BNX3 289 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 RNF8O76064 485 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 OAZ2O95190 189 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 FGAP02671 866 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 CYP2C9P11712 490 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 SLC11A2P49281 568 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 DGKEP52429 567 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 PSG6Q00889 435 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 LEXMQ3ZCV2 418 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 AWAT1Q58HT5 328 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 SMRP1Q8NCR6 262 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 SIGLEC11Q96RL6 698 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 ARMT1Q9H993 441 aa5.6□□□□□ -1.51
RNU4-40P-201ENST00000364351 POT1Q9NUX5 634 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms