RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 LRRFIP2Q9Y608 721 aaKnown RBP4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 FPGT-TNNI3KV9GXZ4 949 aa4.39□□□□□ -1.71
RNU6-28P-201ENST00000362378 GAGE12BA1L429 117 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 GAGE12HA6NDE8 117 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 CD3EAPO15446 510 aaKnown RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 IRAK2O43187 625 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ASNA1O43681 348 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ERN1O75460 977 aaKnown RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 RECQL4O94761 1208 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZFPL1O95159 310 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 RASAL1O95294 804 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 CSF1RP07333 972 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ITGA2BP08514 1039 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 CD53P19397 219 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 NPTX2P47972 431 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 NDUFV1P49821 464 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 CXADRP78310 365 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ATP1A4Q13733 1029 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 E2F2Q14209 437 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 RRP1BQ14684 758 aaKnown RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 CYP2A13Q16696 494 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 HS1BP3Q53T59 392 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 SUGP1Q8IWZ8 645 aaKnown RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ADGRG5Q8IZF4 528 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 SPARTQ8N0X7 666 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 IL17REQ8NFR9 667 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 RSC1A1Q92681 617 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 UBXN10Q96LJ8 280 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 SLC25A32Q9H2D1 315 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 TP63Q9H3D4 680 aaPredicted RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 PARD6AQ9NPB6 346 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 HELLSQ9NRZ9 838 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 TRPM5Q9NZQ8 1165 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 TMOD4Q9NZQ9 345 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 VPS51Q9UID3 782 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 SORCS3Q9UPU3 1222 aa4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 MTO1Q9Y2Z2 717 aaKnown RBP4.38□□□□□ -1.71
RNU6-28P-201ENST00000362378 PCDH17O14917 1159 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 NCAM2O15394 837 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 DHHO43323 396 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 RGS10O43665 173 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 TRIAP1O43715 76 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 CCNT2O60583 730 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SRGAP2O75044 1071 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM155BO75949 473 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SCAF4O95104 1147 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 ARP10275 920 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 PNLIPRP1P54315 467 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 PRKAG1P54619 331 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 BCAT1P54687 386 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 FPGSQ05932 587 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 CCNIQ14094 377 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 ICAM4Q14773 271 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 CD300EQ496F6 205 aaPredicted RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 RABL3Q5HYI8 236 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 RBM20Q5T481 1227 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 CERCAMQ5T4B2 595 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 ARHGAP40Q5TG30 622 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 ICE2Q659A1 982 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SP5Q6BEB4 398 aaPredicted RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SULT6B1Q6IMI4 303 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 ARMC6Q6NXE6 501 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SLC15A3Q8IY34 581 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 PAF1Q8N7H5 531 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 DNAJB14Q8TBM8 379 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SPPL3Q8TCT6 385 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SNX19Q92543 992 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 FUBP1Q96AE4 644 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 NACC2Q96BF6 587 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 GBA2Q9HCG7 927 aaPredicted RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 AURKAIP1Q9NWT8 199 aaPredicted RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 PDP2Q9P2J9 529 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 DNAJB11Q9UBS4 358 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SRP68Q9UHB9 627 aaKnown RBP4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 HS3ST4Q9Y661 456 aa4.37□□□□□ -1.71
RNU6-28P-201ENST00000362378 A0A0B4J269 797 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 A0A1B0GVC2 190 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 F5H697 171 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ANXA6P08133 673 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 ACRV1P26436 265 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 CD6P30203 668 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 MAPK9P45984 424 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 VAV2P52735 878 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 FAM189BP81408 668 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 CRHR2Q13324 411 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 TUBB3Q13509 450 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 FHL3Q13643 280 aa4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 TOB2Q14106 344 aaPredicted RBP4.36□□□□□ -1.71
RNU6-28P-201ENST00000362378 EFR3AQ14156 821 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms