RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ATF6P18850 670 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 PGFP49763 221 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 CENPCQ03188 943 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 PDCLQ13371 301 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 ADGRE1Q14246 886 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 CCDC122Q5T0U0 273 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 CYP4A22Q5TCH4 519 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 MMS22LQ6ZRQ5 1243 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 PIGZQ86VD9 579 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 CLEC4CQ8WTT0 213 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 LACRTQ9GZZ8 138 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 PDCL3Q9H2J4 239 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 CSNK1G1Q9HCP0 422 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 PCDHB5Q9Y5E4 795 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 DUSP10Q9Y6W6 482 aa11.38□□□□□ -0.59
SNX6-201ENST00000362031 VCANP13611 3396 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 EIF3CLB5ME19 914 aaKnown RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 ERBB2P04626 1255 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 EPCAMP16422 314 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 KLRC2P26717 231 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 CLCN4P51793 760 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 USP46P62068 366 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 BST2Q10589 180 aaKnown RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 MTMR3Q13615 1198 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 ACAD10Q6JQN1 1059 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 FMNL3Q8IVF7 1028 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 SCN4BQ8IWT1 228 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 GPR65Q8IYL9 337 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 CCDC170Q8IYT3 715 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 CCDC112Q8NEF3 446 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 VN1R2Q8NFZ6 395 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 ARHGEF26Q96DR7 871 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 EIF3CQ99613 913 aaKnown RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 SEPT5Q99719 369 aaPredicted RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 C11orf70Q9BRQ4 267 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 ISCUQ9H1K1 167 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 TRIM10Q9UDY6 481 aa11.37□□□□□ -0.59
SNX6-201ENST00000362031 AFF4Q9UHB7 1163 aaKnown RBP11.37□□□□□ -0.59
SNX6-201ENST00000362031 USP27XA6NNY8 438 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 E5RJQ4 531 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 NRG2O14511 850 aaPredicted RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 HAPLN1P10915 354 aaPredicted RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 MMP8P22894 467 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 GRIK1P39086 918 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 BCAT1P54687 386 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 TAF5Q15542 800 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 MAPRE1Q15691 268 aaKnown RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 MGAT5BQ3V5L5 792 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 C4orf50Q6ZRC1 276 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 MON1BQ7L1V2 547 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SCUBE3Q8IX30 993 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SMARCD1Q96GM5 515 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 THAP2Q9H0W7 228 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 CYP4F11Q9HBI6 524 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 ST7Q9NRC1 585 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNX6-201ENST00000362031 HESX1Q9UBX0 185 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 STK39Q9UEW8 545 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SALL4Q9UJQ4 1053 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 XPO1O14980 1071 aaKnown RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 GZMAP12544 262 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 ABCB4P21439 1286 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 RRM1P23921 792 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 NRIP1P48552 1158 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 GALCP54803 685 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 STILQ15468 1287 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 Q7L0L9 218 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 MCOLN2Q8IZK6 566 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 TMEM35BQ8NCS4 154 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 SLC22A17Q8WUG5 538 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNX6-201ENST00000362031 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
SNX6-201ENST00000362031 OXCT2Q9BYC2 517 aaPredicted RBP11.36□□□□□ -0.59
SNX6-201ENST00000362031 PAPSS1O43252 624 aaPredicted RBP11.35□□□□□ -0.59
SNX6-201ENST00000362031 RTN2O75298 545 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 RFPL2O75678 378 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 ADH1AP07327 375 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 LCP1P13796 627 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 MAGEA1P43355 309 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 NSFP46459 744 aaKnown RBP11.35□□□□□ -0.59
SNX6-201ENST00000362031 TPGS2Q68CL5 300 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 BHLHA9Q7RTU4 235 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 TMEM110Q86TL2 294 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
SNX6-201ENST00000362031 SPPL2BQ8TCT7 592 aa11.35□□□□□ -0.59
SNX6-201ENST00000362031 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.598e-9■■■□□ 15.5
SNX6-201ENST00000362031 MRPL38Q96DV4 380 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms