RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 KIF5AQ12840 1032 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 SLC39A12Q504Y0 691 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ARHGAP29Q52LW3 1261 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 PAQR9Q6ZVX9 377 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 LRRTM3Q86VH5 581 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 SPATA2LQ8IUW3 424 aaPredicted RBP21.8■■□□□ 1.08
SHISA4-201ENST00000362011 CTNNBL1Q8WYA6 563 aaPredicted RBP21.8■■□□□ 1.08
SHISA4-201ENST00000362011 TRIM11Q96F44 468 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 TMLHEQ9NVH6 421 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 A0A0U1RQJ8 604 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 C2CD2LO14523 706 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 KRT86O43790 486 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 TMEM253P0C7T8 217 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 FAM200BP0CF97 657 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 CPB1P15086 417 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ABCB4P21439 1286 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 PDE4CQ08493 712 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 NFE2Q16621 373 aaPredicted RBP21.8■■□□□ 1.08
SHISA4-201ENST00000362011 MON1BQ7L1V2 547 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ERICH1Q86X53 443 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 GPR65Q8IYL9 337 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 MCOLN2Q8IZK6 566 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 FBXO22Q8NEZ5 403 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ATRIPQ8WXE1 791 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 SMARCD1Q96GM5 515 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 VCPIP1Q96JH7 1222 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 C17orf80Q9BSJ5 609 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 DUSP16Q9BY84 665 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ZBP1Q9H171 429 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 KRT82Q9NSB4 513 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ADAM22Q9P0K1 906 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 TFR2Q9UP52 801 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 LZTS1Q9Y250 596 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 SSX2IPQ9Y2D8 614 aa21.8■■□□□ 1.08
SHISA4-201ENST00000362011 ESPNB1AK53 854 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 C5orf67F2Z3F1 127 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 AP1G2O75843 785 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 RB1P06400 928 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 MYBL1P10243 752 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 NPR3P17342 541 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 ARPP19P56211 112 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 C1QBPQ07021 282 aaKnown RBP21.79■■□□□ 1.08
SHISA4-201ENST00000362011 PDCLQ13371 301 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 ZNF653Q96CK0 615 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 C11orf70Q9BRQ4 267 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 LACRTQ9GZZ8 138 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 THAP2Q9H0W7 228 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 LZTFL1Q9NQ48 299 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 MRPL17Q9NRX2 175 aaKnown RBP21.79■■□□□ 1.08
SHISA4-201ENST00000362011 CYTH4Q9UIA0 394 aa21.79■■□□□ 1.08
SHISA4-201ENST00000362011 NCANO14594 1321 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 XPO1O14980 1071 aaKnown RBP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 CALB1P05937 261 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 CTSAP10619 480 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 MMP8P22894 467 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 BDNFP23560 247 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 ARHGAP25P42331 645 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 GPC5P78333 572 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 CREMQ03060 361 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 SMARCB1Q12824 385 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 COL19A1Q14993 1142 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 PTPN20Q4JDL3 420 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 LIN9Q5TKA1 542 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 RSPO2Q6UXX9 243 aaPredicted RBP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 MMS22LQ6ZRQ5 1243 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 CLEC20AQ6ZU45 233 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 IPO4Q8TEX9 1081 aaKnown RBP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 STK32AQ8WU08 396 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 SLC35F5Q8WV83 523 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 MRPL38Q96DV4 380 aaKnown RBP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 FUBP3Q96I24 572 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHISA4-201ENST00000362011 PCDHB5Q9Y5E4 795 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 CDY1Q9Y6F8 540 aa21.78■■□□□ 1.08
SHISA4-201ENST00000362011 BTNL10A8MVZ5 291 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 PLA2G4AP47712 749 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 SNX16P57768 344 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 UBE3AQ05086 875 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 PTP4A2Q12974 167 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 GPR17Q13304 367 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 SLC8B1Q6J4K2 584 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 C2orf15Q8WU43 125 aaKnown RBP21.77■■□□□ 1.07
SHISA4-201ENST00000362011 CPXM1Q96SM3 734 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 C11orf84Q9BUA3 381 aaPredicted RBP21.77■■□□□ 1.07
SHISA4-201ENST00000362011 MIS12Q9H081 205 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 SYNCQ9H7C4 482 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 CYLDQ9NQC7 956 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 ABI2Q9NYB9 513 aaPredicted RBP21.77■■□□□ 1.07
SHISA4-201ENST00000362011 TRIM10Q9UDY6 481 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 CNOT8Q9UFF9 292 aaKnown RBP21.77■■□□□ 1.07
SHISA4-201ENST00000362011 STRIP2Q9ULQ0 834 aa21.77■■□□□ 1.07
SHISA4-201ENST00000362011 A0A0A6YYK5 440 aaPredicted RBP21.76■■□□□ 1.07
SHISA4-201ENST00000362011 GRXCR2A6NFK2 248 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 TULP2O00295 520 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 RPL17P18621 184 aaKnown RBP21.76■■□□□ 1.07
SHISA4-201ENST00000362011 RGS7P49802 495 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 CDR1P51861 262 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 MAP3K7CLP57077 242 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 ROR1Q01973 937 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 CFAP221Q4G0U5 840 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms