RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 USP33Q8TEY7 942 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 TCEAL3Q969E4 200 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 PCED1BQ96HM7 432 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 MMS19Q96T76 1030 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 KIAA1586Q9HCI6 787 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 TRPM5Q9NZQ8 1165 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 MTMR6Q9Y217 621 aa18.56■□□□□ 0.56
COL9A1-203ENST00000360859 ZNF840PA6NDX5 716 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 K7EQS6 105 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 LEFTY2O00292 366 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 ANXA13P27216 316 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 PMLP29590 882 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 OPRD1P41143 372 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 DGKEP52429 567 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 CREB5Q02930 508 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 GAB4Q2WGN9 574 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 TRAPPC11Q7Z392 1133 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 TSTD1Q8NFU3 115 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 MRPL45Q9BRJ2 306 aaKnown RBP18.55■□□□□ 0.56
COL9A1-203ENST00000360859 TTLL2Q9BWV7 592 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 RNF38Q9H0F5 515 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 KBTBD4Q9NVX7 518 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 EHD2Q9NZN4 543 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
COL9A1-203ENST00000360859 MYO16Q9Y6X6 1858 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 BCLAF3A2AJT9 711 aaKnown RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 ANTXRLA6NF34 631 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 F8VP50 259 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 TRIM66O15016 1216 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 CST3P01034 146 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 GNL1P36915 607 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 SEC13P55735 322 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 SLC7A9P82251 487 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 E2F4Q16254 413 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 C2orf27AQ580R0 203 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 MDH1BQ5I0G3 518 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 RNF43Q68DV7 783 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 LSM14BQ9BX40 385 aaKnown RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 LRRC27Q9C0I9 530 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 SNX25Q9H3E2 840 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 ANGPTL2Q9UKU9 493 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 INVSQ9Y283 1065 aa18.54■□□□□ 0.56
COL9A1-203ENST00000360859 HELZP42694 1942 aaKnown RBP18.54■□□□□ 0.56
COL9A1-203ENST00000360859 EIF3DO15371 548 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL9A1-203ENST00000360859 CAVIN2O95810 425 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 CYP17A1P05093 508 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 DLATP10515 647 aaKnown RBP18.53■□□□□ 0.56
COL9A1-203ENST00000360859 GBP1P32455 592 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 PPP3CCP48454 512 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 STK38Q15208 465 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 SNRNP35Q16560 246 aaKnown RBP18.53■□□□□ 0.56
COL9A1-203ENST00000360859 EPM2AIP1Q7L775 607 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-203ENST00000360859 HS2ST1Q7LGA3 356 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 KIAA1958Q8N8K9 716 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 ZNF507Q8TCN5 953 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 C8orf48Q96LL4 319 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 TPSD1Q9BZJ3 242 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 ZSCAN16Q9H4T2 348 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-203ENST00000360859 AGPAT3Q9NRZ7 376 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 CPQQ9Y646 472 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 CHD8Q9HCK8 2581 aa18.53■□□□□ 0.56
COL9A1-203ENST00000360859 TGFB1I1O43294 461 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 TACC1O75410 805 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 OLFM2O95897 454 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 ABL1P00519 1130 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 PTPN1P18031 435 aaKnown RBP18.52■□□□□ 0.56
COL9A1-203ENST00000360859 TNNI1P19237 187 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 CACNA2D1P54289 1103 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 ASIC1P78348 528 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 SHC2P98077 582 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 TAF10Q12962 218 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 PSMD6Q15008 389 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
COL9A1-203ENST00000360859 RASSF3Q86WH2 238 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 ADGRG2Q8IZP9 1017 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 CCDC33Q8N5R6 958 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 OR6B3Q8NGW1 331 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
COL9A1-203ENST00000360859 CGRRF1Q99675 332 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 EDEM2Q9BV94 578 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 CUEDC2Q9H467 287 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 TMEM30AQ9NV96 361 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 SMPD4Q9NXE4 827 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 MMP17Q9ULZ9 603 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 PTPRDP23468 1912 aa18.52■□□□□ 0.56
COL9A1-203ENST00000360859 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
COL9A1-203ENST00000360859 LAMA1P25391 3075 aa18.51■□□□□ 0.55
COL9A1-203ENST00000360859 CNOT1A5YKK6 2376 aaKnown RBP18.51■□□□□ 0.55
COL9A1-203ENST00000360859 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
COL9A1-203ENST00000360859 KCNK5O95279 499 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms