RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ZNF184Q99676 751 aaPredicted RBP11.39□□□□□ -0.59
RPE-202ENST00000359429 PDCD2LQ9BRP1 358 aa11.39□□□□□ -0.59
RPE-202ENST00000359429 POLR3FQ9H1D9 316 aaPredicted RBP11.39□□□□□ -0.59
RPE-202ENST00000359429 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
RPE-202ENST00000359429 MMADHCQ9H3L0 296 aaPredicted RBP11.39□□□□□ -0.59
RPE-202ENST00000359429 STRIP2Q9ULQ0 834 aa11.39□□□□□ -0.59
RPE-202ENST00000359429 YDJCA8MPS7 323 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 CAPN14A8MX76 684 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 SFNP31947 248 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 GCLCP48506 637 aaPredicted RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 BASP1P80723 227 aaKnown RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 SLC25A11Q02978 314 aaKnown RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 TAF5Q15542 800 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 SWSAP1Q6NVH7 229 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 MTHFD1LQ6UB35 978 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 EGFL6Q8IUX8 553 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 APLFQ8IW19 511 aaPredicted RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 CFAP61Q8NHU2 1237 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 PANX3Q96QZ0 392 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 TMEM39BQ9GZU3 492 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 RBAKQ9NYW8 714 aaPredicted RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 ZNF212Q9UDV6 495 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 PCDHA10Q9Y5I2 948 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 MAP3K7O43318 606 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 USP1O94782 785 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 RAP1GDS1P52306 607 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 KRT76Q01546 638 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 ENPEPQ07075 957 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 UBR7Q8N806 425 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 JOSD2Q8TAC2 188 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 ZFAND2BQ8WV99 257 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 TFAP2BQ92481 460 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 RMDN3Q96TC7 470 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 CYTH2Q99418 400 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 QTRT2Q9H974 415 aaKnown RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 C17orf75Q9HAS0 396 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 PLA2G4CQ9UP65 541 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
RPE-202ENST00000359429 CNTNAP1P78357 1384 aa11.38□□□□□ -0.59
RPE-202ENST00000359429 CYB561D2O14569 222 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 C1QAP02745 245 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 KDSRQ06136 332 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 NCOA4Q13772 614 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 RIPOR1Q6ZS17 1223 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 PDIK1LQ8N165 341 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 SLC25A41Q8N5S1 370 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 CEP120Q8N960 986 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 PPFIBP2Q8ND30 876 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 FGD4Q96M96 766 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 SRPK1Q96SB4 655 aaKnown RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 PHACTR1Q9C0D0 580 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 C20orf27Q9GZN8 174 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 PCMTD2Q9NV79 361 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 MARCOQ9UEW3 520 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 CNTNAP2Q9UHC6 1331 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 IQANK1A0A1B0GTG1 560 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 LRCH4O75427 683 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 LGR5O75473 907 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 RTN3O95197 1032 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 CALB1P05937 261 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 LYNP07948 512 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 KITP10721 976 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 ANPEPP15144 967 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 GHRHRQ02643 423 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 BST1Q10588 318 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 IZUMO2Q6UXV1 221 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 ARID3BQ8IVW6 561 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 CCDC60Q8IWA6 550 aaPredicted RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 TMEM143Q96AN5 459 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 TUBGCP5Q96RT8 1024 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 TARS2Q9BW92 718 aaKnown RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 PXMP2Q9NR77 195 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 DDX56Q9NY93 547 aaKnown RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
RPE-202ENST00000359429 SLC7A8Q9UHI5 535 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 PPM1HQ9ULR3 514 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 STYXL1Q9Y6J8 313 aa11.37□□□□□ -0.59
RPE-202ENST00000359429 CCDC195A0A1B0GUA6 201 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 A8MXQ7 604 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 CXorf49A8MYA2 514 aaPredicted RBP11.36□□□□□ -0.59
RPE-202ENST00000359429 MAGEC1O60732 1142 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 DGAT1O75907 488 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 GSTA2P09210 222 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 HARSP12081 509 aaKnown RBP11.36□□□□□ -0.59
RPE-202ENST00000359429 KDELR1P24390 212 aa11.36□□□□□ -0.59
RPE-202ENST00000359429 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
RPE-202ENST00000359429 DPYSL3Q14195 570 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms