RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 LIN52Q52LA3 116 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RAB2BQ8WUD1 216 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 APOPT1Q96IL0 206 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM8A1Q9UBU6 413 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 IFRD1O00458 451 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ATP9BO43861 1147 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 H6PDO95479 791 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PMS1P54277 932 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ARPC4P59998 168 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 NCALDP61601 193 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 BASP1P80723 227 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ANGEL2Q5VTE6 544 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ABRAQ8N0Z2 381 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF536O15090 1300 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF487B1APH4 448 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 HMGCRP04035 888 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 JAK1P23458 1154 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 EEF1B2P24534 225 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 NCKAP1LP55160 1127 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 YWHAGP61981 247 aaKnown RBP eCLIP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PDIA2Q13087 525 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PKN2Q16513 984 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 LUZP2Q86TE4 346 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM172AQ8WUF8 416 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SLC7A3Q8WY07 619 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 VPS33AQ96AX1 596 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MTMR4Q9NYA4 1195 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MIIPQ5JXC2 388 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 USP17L2Q6R6M4 530 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MCUQ8NE86 351 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 HAPLN3Q96S86 360 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 IL25Q9H293 177 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TRPC5Q9UL62 973 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CEP170BQ9Y4F5 1589 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 H0YC42 278 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 EML1O00423 815 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CYP26A1O43174 497 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DENRO43583 198 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PRDM1O75626 825 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PLEKHA8P1O95397 391 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TUBA3EQ6PEY2 450 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF571Q7Z3V5 609 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DQX1Q8TE96 717 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CNDP1Q96KN2 507 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 KIAA1683Q9H0B3 1180 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TNS3Q68CZ2 1445 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 C8BP07358 591 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 EIF3EP60228 445 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DGUOKQ16854 277 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TLDC1Q6P9B6 456 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ARHGEF26Q96DR7 871 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CCDC78A2IDD5 438 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FCHO1O14526 889 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DAB1O75553 588 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RPLP2P05387 115 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MYL3P08590 195 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SETD9Q8NE22 299 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FBXO25Q8TCJ0 367 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PHF24Q9UPV7 400 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ALBP02768 609 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ENO1P06733 434 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 OSBPP22059 807 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TUFMP49411 452 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MTTPP55157 894 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PSMC5P62195 406 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 THEMIS2Q5TEJ8 643 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FCGR1BQ92637 280 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 LHX5Q9H2C1 402 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 NCKIPSDQ9NZQ3 722 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PROZP22891 400 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 GUCY1A2P33402 732 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CYP2J2P51589 502 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TSC22D1Q15714 1073 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RBM17Q96I25 401 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ANKRD36BP1Q96IX9 119 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 GANQ9H2C0 597 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CSPG5O95196 566 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FGFR2P21802 821 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SCNN1DP51172 638 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ROR1Q01973 937 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 IFRD2Q12894 506 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MYO1HQ8N1T3 1032 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 KMT5AQ9NQR1 393 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 STMN3Q9NZ72 180 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 A0A087WWV3 80 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PADI6Q6TGC4 694 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 BTBD6Q96KE9 485 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SCYL1Q96KG9 808 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PLEKHG4BQ96PX9 1271 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 B3GNT3Q9Y2A9 372 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 GRK3P35626 688 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 BCAR1P56945 870 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TTC23Q5W5X9 447 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 REEP2Q9BRK0 252 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 CLDN25C9JDP6 229 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 NDUFS2O75306 463 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms